fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G10350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025772 not found in 358aa AT4G10350.1 1st_1st 0.592541436 Ia
Gm032208 not found in 318aa AT4G10350.1 not_1st 0.501381215 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G10350.1     MGSSSNGGVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKI
gm032208_Glyma1 -------------------------------------MDVIREVDLNKMEPWDLQERCRI
gm025772_Glyma0 MGSSTNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRI
                                                     *:*********:*********:*

AT4G10350.1     GSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG
gm032208_Glyma1 GSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG
gm025772_Glyma0 GSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYKG
                ****************************:****************:**************

AT4G10350.1     RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFKVVNEGSSSINSLDQH
gm032208_Glyma1 RAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIVNEGGSTHNP-DQQ
gm025772_Glyma0 RAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIENEGGSTHKP-DHQ
                *******************.:***....********** ******: ***.*: :. *::

AT4G10350.1     NHDASNNNHALQARSFMHRDSPY-----QLVRNHGAMTFELNKPDLALHQYPPIFHKPP-
gm032208_Glyma1 INNSSNTN----ARSY--RENHYLLHQQQNPRNSSGL--ELDKPELALHY--PHLQNPPY
gm025772_Glyma0 INNSSNTN----ARSY--RENHYLLHQQQNPRNSSGL--ELDKPELALHYPPPHLQNPPY
                 :::**.*    ***:  *:. *     *  ** ..:  **:**:****   * :::** 

AT4G10350.1     -------------SLGFDYSSGL------------ARDSESAASEGLQYQQACEPGLDVG
gm032208_Glyma1 SLFQSQPLLQIQKPMVYDYSYTSDTPIMAKQLMTNPRDCES-GSDGLRY-QVSESGMEVG
gm025772_Glyma0 SLFQSQPLLQTQKPMVYDYSYTSDTPIMAKQLMTNPRDCES-GSDGLRY-QVSESGMEVG
                             .: :***               .**.** .*:**:* *..*.*::**

AT4G10350.1     TCETVASHNHQQGLG------EWAMMDRLVTCHM-GNEDSSRGITYEDGNNNSSSVVQPV
gm032208_Glyma1 SCEP----NQEMGTGRGEGINEWGVLDRLVTSHL-GNEDSSKGVRFEEANPPS------V
gm025772_Glyma0 SCEP----NQEMGTGRGEGINEWGVLDRLVTSHLAGNEDSSKGVRFEEANPQS------V
                :**.    *:: * *      **.::*****.*: ******:*: :*:.*  *      *

AT4G10350.1     PATNQLTLRSEMDFWGYSK
gm032208_Glyma1 HQINQLSLRGEMDFWAYGK
gm025772_Glyma0 HQINQLSLRGEMDFWAYGK
                   ***:**.*****.*.*
BoxShade v3.31 C (beta, 970507) Output
AT4G10350.1     M G S S S N G G V P P G F R F H P T D E E L L H Y Y L K K K I S Y Q K F E M E V I R E V D L N K L E P W D L Q E R C K I
gm032208_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D V I R E V D L N K M E P W D L Q E R C R I
gm025772_Glyma0    M G S S T N G G V P P G F R F H P T D E E L L H Y Y L K K K V S F Q K F D M D V I R E V D L N K M E P W D L Q E R C R I
 
AT4G10350.1     G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T H A G F W K A T G R D K C I R N S Y K K I G M R K T L V F Y K G
gm032208_Glyma1    G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T N A G F W K A T G R D K C I R N S Y K K I G M R K T L V F Y K G
gm025772_Glyma0    G S T P Q N E W Y F F S H K D R K Y P T G S R T N R A T N A G F W K A T G R D K C I R N S F K K I G M R K T L V F Y K G
 
AT4G10350.1     R A P H G Q K T D W I M H E Y R L E D A D D P Q A N P S E D G W V V C R V F M K K N L F K V V N E G S S S I N S L D Q H
gm032208_Glyma1    R A P H G Q K T D W I M H E Y R L E D G N D P Q G S A N E D G W V V C R V F K K K N L F K I V N E G G S T H N P - D Q Q
gm025772_Glyma0    R A P H G Q K T D W I M H E Y R L E D G N D P Q G S A N E D G W V V C R V F K K K N L F K I E N E G G S T H K P - D H Q
 
AT4G10350.1     N H D A S N N N H A L Q A R S F M H R D S P Y - - - - - Q L V R N H G A M T F E L N K P D L A L H Q Y P P I F H K P P -
gm032208_Glyma1    I N N S S N T N - - - - A R S Y - - R E N H Y L L H Q Q Q N P R N S S G L - - E L D K P E L A L H Y - - P H L Q N P P Y
gm025772_Glyma0    I N N S S N T N - - - - A R S Y - - R E N H Y L L H Q Q Q N P R N S S G L - - E L D K P E L A L H Y P P P H L Q N P P Y
 
AT4G10350.1     - - - - - - - - - - - - - S L G F D Y S S G L - - - - - - - - - - - - A R D S E S A A S E G L Q Y Q Q A C E P G L D V G
gm032208_Glyma1    S L F Q S Q P L L Q I Q K P M V Y D Y S Y T S D T P I M A K Q L M T N P R D C E S - G S D G L R Y - Q V S E S G M E V G
gm025772_Glyma0    S L F Q S Q P L L Q T Q K P M V Y D Y S Y T S D T P I M A K Q L M T N P R D C E S - G S D G L R Y - Q V S E S G M E V G
 
AT4G10350.1     T C E T V A S H N H Q Q G L G - - - - - - E W A M M D R L V T C H M - G N E D S S R G I T Y E D G N N N S S S V V Q P V
gm032208_Glyma1    S C E P - - - - N Q E M G T G R G E G I N E W G V L D R L V T S H L - G N E D S S K G V R F E E A N P P S - - - - - - V
gm025772_Glyma0    S C E P - - - - N Q E M G T G R G E G I N E W G V L D R L V T S H L A G N E D S S K G V R F E E A N P Q S - - - - - - V
 
AT4G10350.1     P A T N Q L T L R S E M D F W G Y S K
gm032208_Glyma1    H Q I N Q L S L R G E M D F W A Y G K
gm025772_Glyma0    H Q I N Q L S L R G E M D F W A Y G K
 
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