fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G11660.1 EDLTPRLFGVSIGVK at 313/377 in AT4G11660.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026513 RSSSPGLSLELLDENE in 165/286 AT5G62020.1 not_not 0.408730158 III
Pt023495 not found in 301aa AT5G62020.1 not_not 0.408730158 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G11660.1     ----MPGEQ-TGETPTVAGVGGGGAGCSAGNSGGSSGCGAGGGGGGSGGGGGGGGDSQRS
pt023495_POPTR_ MSPPPLVEQNSTDTPTT-----------------------------------GGGETSRT
pt026513_POPTR_ MASPLPVEQNSGETPPSP------------------------------LAAAAGGETSRS
                       ** : :**.                                    .**::.*:

AT4G11660.1     IPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQL
pt023495_POPTR_ IPTPFLTKTYQIVDDHTIDDVVSWNEDGSSFIVWDPTVFARDLLPKYFKHNNFSSFVRQL
pt026513_POPTR_ IPTPFLTKTFKIVDDHTIDDVISWNEDGSSFVVWNPTLFSRDLLPKFFKHNNFSSFVRQL
                *********:::*:* . *:::******::*:** *: *:******:*************

AT4G11660.1     NTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKISQPAMAAAAAAAAAAVAASAVTVA
pt023495_POPTR_ NTYGFRKVVPDRWEFSNESFRRGEKNLLANIQRRKI--PA----VVTAPAAVVPAMVK--
pt026513_POPTR_ NTYGFRKVVPDRWEFSNECFRKGEKNLLCEIQRRKL--VATVAQVVAAPAAV--KVIK--
                *****************:.*::*** ** :*****:   *    ..:*.***    :.  

AT4G11660.1     AVPVVAHIVSPSNSGEEQVI--SSNSSPAAAAAAIGGVVGGGSLQRTTSCTTAPELVEEN
pt023495_POPTR_ --------TSSNSSSDEQVI--SRSSSPGLSV----------------------DLIDEN
pt026513_POPTR_ --------TSSNSSSDEQVVISTRSSSPGLSL----------------------ELLDEN
                        .*...*.:***:  : .***. :                       :*::**

AT4G11660.1     ERLRKDNERLRKEMTKLKGLYANIYTLMANFTPGQEDCAHLLPEG----KPLDLLPERQE
pt023495_POPTR_ ERLRKENVQLKGELTEMKSLCANIFSLVSTYANSR--------EGKGVRKMLDLLPMKEE
pt026513_POPTR_ ERLRKENVRLKGELTEMKSLCGNIFSLVSDFESLRE------EEEEEVRKVLDLLPMKEE
                *****:* :*: *:*::*.* .**::*:: :   :        *     * ***** ::*

AT4G11660.1     MSEAIMASEIETGIGLKLGEDLTPRLFGVSIGVKRARR---EEELGAAEEEDDDRREAAA
pt023495_POPTR_ EREG-------------------ARIFGVEVGVKRGREGSGDMEEGEAEGEEDGMQLQLR
pt026513_POPTR_ VGDG-------------------ARIFGVEVGVKRGRELSGDMEV-----EEDGMQLRLR
                  :.                   .*:***.:****.*.   : *      *:*. :    

AT4G11660.1     QEGEQSS-DVKAEPMEENNSGNHNGS------WLE----LGK----
pt023495_POPTR_ QPGCGG--GLKIE-TNGCQDGNSNGGGDQDAPWLEQCHRLNQKMCD
pt026513_POPTR_ QPGGGSSDGVKIE-VNGSRNGDR-----------------------
                * *  .  .:* *  :  ..*:
BoxShade v3.31 C (beta, 970507) Output
AT4G11660.1     - - - - M P G E Q - T G E T P T V A G V G G G G A G C S A G N S G G S S G C G A G G G G G G S G G G G G G G G D S Q R S
pt023495_POPTR_    M S P P P L V E Q N S T D T P T T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G G E T S R T
pt026513_POPTR_    M A S P L P V E Q N S G E T P P S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A A A A G G E T S R S
 
AT4G11660.1     I P T P F L T K T Y Q L V E D P V Y D E L I S W N E D G T T F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L
pt023495_POPTR_    I P T P F L T K T Y Q I V D D H T I D D V V S W N E D G S S F I V W D P T V F A R D L L P K Y F K H N N F S S F V R Q L
pt026513_POPTR_    I P T P F L T K T F K I V D D H T I D D V I S W N E D G S S F V V W N P T L F S R D L L P K F F K H N N F S S F V R Q L
 
AT4G11660.1     N T Y G F R K V V P D R W E F S N D C F K R G E K I L L R D I Q R R K I S Q P A M A A A A A A A A A A V A A S A V T V A
pt023495_POPTR_    N T Y G F R K V V P D R W E F S N E S F R R G E K N L L A N I Q R R K I - - P A - - - - V V T A P A A V V P A M V K - -
pt026513_POPTR_    N T Y G F R K V V P D R W E F S N E C F R K G E K N L L C E I Q R R K L - - V A T V A Q V V A A P A A V - - K V I K - -
 
AT4G11660.1     A V P V V A H I V S P S N S G E E Q V I - - S S N S S P A A A A A A I G G V V G G G S L Q R T T S C T T A P E L V E E N
pt023495_POPTR_    - - - - - - - - T S S N S S S D E Q V I - - S R S S S P G L S V - - - - - - - - - - - - - - - - - - - - - - D L I D E N
pt026513_POPTR_    - - - - - - - - T S S N S S S D E Q V V I S T R S S S P G L S L - - - - - - - - - - - - - - - - - - - - - - E L L D E N
 
AT4G11660.1     E R L R K D N E R L R K E M T K L K G L Y A N I Y T L M A N F T P G Q E D C A H L L P E G - - - - K P L D L L P E R Q E
pt023495_POPTR_    E R L R K E N V Q L K G E L T E M K S L C A N I F S L V S T Y A N S R - - - - - - - - E G K G V R K M L D L L P M K E E
pt026513_POPTR_    E R L R K E N V R L K G E L T E M K S L C G N I F S L V S D F E S L R E - - - - - - E E E E E V R K V L D L L P M K E E
 
AT4G11660.1     M S E A I M A S E I E T G I G L K L G E D L T P R L F G V S I G V K R A R R - - - E E E L G A A E E E D D D R R E A A A
pt023495_POPTR_    E R E G - - - - - - - - - - - - - - - - - - - A R I F G V E V G V K R G R E G S G D M E E G E A E G E E D G M Q L Q L R
pt026513_POPTR_    V G D G - - - - - - - - - - - - - - - - - - - A R I F G V E V G V K R G R E L S G D M E V - - - - - E E D G M Q L R L R
 
AT4G11660.1     Q E G E Q S S - D V K A E P M E E N N S G N H N G S - - - - - - W L E - - - - L G K - - - -
pt023495_POPTR_    Q P G C G G - - G L K I E - T N G C Q D G N S N G G G D Q D A P W L E Q C H R L N Q K M C D
pt026513_POPTR_    Q P G G G S S D G V K I E - V N G S R N G D R - - - - - - - - - - - - - - - - - - - - - - -
 
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