fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G11660.1 EDLTPRLFGVSIGVK at 313/377 in AT4G11660.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028610 SEVSPRLFGVSIGFK in 284/343 AT4G11660.1 1st_1st 0.553571428 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G11660.1     ---MPGEQTGETPTVAGVGGGGAGCSAGNSGGSSGCGAGGGGGGSGGGGGGGGDSQRSIP
pt028610_POPTR_ MPPLPVEQTGESP---------AAC--------------GGGAAAGGPPSGSGDSQRSLP
                   :* *****:*         *.*              ***..:**  .*.******:*

AT4G11660.1     TPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNT
pt028610_POPTR_ TPFLTKTYQLVDDPSVDDLISWNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNT
                ***********:**  *:*****:**:*********************************

AT4G11660.1     YGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKISQPAMAAAAAAAAAAVAASAVTVAAV
pt028610_POPTR_ YGFRKVVPDRWEFANDCFRRGEKALLRDIQRRKIS--------TMAASAVTSASVTVAAI
                *************:****:**** ***********        : **:**::::*****:

AT4G11660.1     PVVAHIVSPSNSGEEQVISSNSSPAAAAAAIGGVVGGG-SLQRTTSCTTAPELVEENERL
pt028610_POPTR_ PTVARAVSPANSGDDQGISSTSSPGGA-----GTAGGANSFLRTTSCTTTPEILEENERL
                *.**: ***:***::* ***.***..*     *..**. *: *******:**::******

AT4G11660.1     RKDNERLRKEMTKLKGLYANIYTLMANF-TPGQE----DCAHLLPEGK-PLDLLPERQEM
pt028610_POPTR_ RKENSALSHELTQLRGLCNNIMVLMNNYASPQLEGNSGNSNNNLAEVKAALELLP----V
                **:*. * :*:*:*:**  ** .** *: :*  *    :. : *.* * .*:***    :

AT4G11660.1     SEAIMASEIETGIGLKLGEDLTPRLFGVSIGVKRARREEELGAAEEEDDDRREAAAQEGE
pt028610_POPTR_ ADEVAVSGRPRGGAAATESEVSPRLFGVSIGFKRVRIDEE----EEEEGNRQQTEGKEHE
                :: : .*    * .    .:::*********.**.* :**    ***:.:*::: .:* *

AT4G11660.1     QSSDVKAEPME--ENNSGNHNGSWLELGK
pt028610_POPTR_ --SDVKAEPLDGSSGNSDHQDQRWLDLGK
                  *******::  ..**.:::  **:***
BoxShade v3.31 C (beta, 970507) Output
AT4G11660.1     - - - M P G E Q T G E T P T V A G V G G G G A G C S A G N S G G S S G C G A G G G G G G S G G G G G G G G D S Q R S I P
pt028610_POPTR_    M P P L P V E Q T G E S P - - - - - - - - - A A C - - - - - - - - - - - - - - G G G A A A G G P P S G S G D S Q R S L P
 
AT4G11660.1     T P F L T K T Y Q L V E D P V Y D E L I S W N E D G T T F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T
pt028610_POPTR_    T P F L T K T Y Q L V D D P S V D D L I S W N D D G S T F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T
 
AT4G11660.1     Y G F R K V V P D R W E F S N D C F K R G E K I L L R D I Q R R K I S Q P A M A A A A A A A A A A V A A S A V T V A A V
pt028610_POPTR_    Y G F R K V V P D R W E F A N D C F R R G E K A L L R D I Q R R K I S - - - - - - - - T M A A S A V T S A S V T V A A I
 
AT4G11660.1     P V V A H I V S P S N S G E E Q V I S S N S S P A A A A A A I G G V V G G G - S L Q R T T S C T T A P E L V E E N E R L
pt028610_POPTR_    P T V A R A V S P A N S G D D Q G I S S T S S P G G A - - - - - G T A G G A N S F L R T T S C T T T P E I L E E N E R L
 
AT4G11660.1     R K D N E R L R K E M T K L K G L Y A N I Y T L M A N F - T P G Q E - - - - D C A H L L P E G K - P L D L L P E R Q E M
pt028610_POPTR_    R K E N S A L S H E L T Q L R G L C N N I M V L M N N Y A S P Q L E G N S G N S N N N L A E V K A A L E L L P - - - - V
 
AT4G11660.1     S E A I M A S E I E T G I G L K L G E D L T P R L F G V S I G V K R A R R E E E L G A A E E E D D D R R E A A A Q E G E
pt028610_POPTR_    A D E V A V S G R P R G G A A A T E S E V S P R L F G V S I G F K R V R I D E E - - - - E E E E G N R Q Q T E G K E H E
 
AT4G11660.1     Q S S D V K A E P M E - - E N N S G N H N G S W L E L G K
pt028610_POPTR_    - - S D V K A E P L D G S S G N S D H Q D Q R W L D L G K
 
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