fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G11660.1 EDLTPRLFGVSIGVK at 313/377 in AT4G11660.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023593 PDQAARLFGVSIGLK in 564/1013 AT4G11660.1 1st_1st 0.267857142 Ib
PDQAARLFGVSIGLK in 894/1013
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G11660.1     --------------------------MPGEQTGETPTVAGVGG-GGAGCSAGNS-----G
Sb023593_Sorbi1 LVLEASTRWGGPTHLELDPSWSDPAPWSGPLQGRIEWYTGVGRYMGHGCWSGDGSLLLLG
                                           .*   *.    :***   * ** :*:.     *

AT4G11660.1     GSSGCG-------------------------------------AGGGGGGS---------
Sb023593_Sorbi1 CCCCCGSDASVFTSPPAPWSACSSPVSSSSRIRFSPMETPNSLAAWSGSASATRPAAAVA
                 .. **                                     *. .*..*         

AT4G11660.1     ------------GGGGGGGGDSQRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWR
Sb023593_Sorbi1 RPGHAGIRSRIAGGRGGGAGAASDDSPEQLTT------EDSAAEASSCWEE---AYLVMR
                            ** ***.* :. . *  : *      **.. :   .*:*   :::* *

AT4G11660.1     PAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRK
Sb023593_Sorbi1 ----SRMLLQSFF-------------------ICPS---------SRVSRAFSR--RRRS
                    :* ** .:*                   : *.         .* .: : *  :**.

AT4G11660.1     ISQPAMAAAAAAAAAAVAASAVTVAAVPVVAHIVSPSNSGEEQVISSNSSPAAAAAAIGG
Sb023593_Sorbi1 FSSPVSPDAEAPPEAPDAAACGWSSADPEL----------DERTCSSVESAGEAGRVTGS
                :*.*. . * *.. *. **:.   :* * :          :*:. ** .*.. *. . *.

AT4G11660.1     VVGGGSLQRTTSCTTAPE-------------LVEENERLRKDNERLRKEMTKLKGLYANI
Sb023593_Sorbi1 AMGIGA----AATVTAPDAAAAAAVASPATGVAGASATLRRCMSQRRRFSPRRKKSLANS
                .:* *:    :: .***:             :.  .  **:  .: *:  .: *   ** 

AT4G11660.1     YTLMANFTPGQEDCAHLLPEGKPLDLLPERQEMSEAIMASEIETGIGLKLGEDLTPR---
Sb023593_Sorbi1 HRSGTIFV-GVE-LPHEAGEVVVLEILGEE-------VARELRRPPHHERGPVVVPRDHV
                :   : *. * *  .*   *   *::* *.       :* *:.     : *  :.**   

AT4G11660.1     --------LFGVSIGVKRARREEELGAAEEEDDDRREAAAQEGEQSSDVKAEPMEENNSG
Sb023593_Sorbi1 VHRRVVHQL--VRLGQER-RRQRPLPGRVRSKRWRR---GRRWRRRSGVAA-------NG
                        *  * :* :* **:. * .  ...  **   .:. .: *.* *       .*

AT4G11660.1     NHNGSWLELGK---------------
Sb023593_Sorbi1 LPGGGAALLGHLASARSPAGSKPAKP
                  .*.   **:
BoxShade v3.31 C (beta, 970507) Output
AT4G11660.1     - - - - - - - - - - - - - - - - - - - - - - - - - - M P G E Q T G E T P T V A G V G G - G G A G C S A G N S - - - - - G
Sb023593_Sorbi1    L V L E A S T R W G G P T H L E L D P S W S D P A P W S G P L Q G R I E W Y T G V G R Y M G H G C W S G D G S L L L L G
 
AT4G11660.1     G S S G C G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G G G G G G S - - - - - - - - -
Sb023593_Sorbi1    C C C C C G S D A S V F T S P P A P W S A C S S P V S S S S R I R F S P M E T P N S L A A W S G S A S A T R P A A A V A
 
AT4G11660.1     - - - - - - - - - - - - G G G G G G G G D S Q R S I P T P F L T K T Y Q L V E D P V Y D E L I S W N E D G T T F I V W R
Sb023593_Sorbi1    R P G H A G I R S R I A G G R G G G A G A A S D D S P E Q L T T - - - - - - E D S A A E A S S C W E E - - - A Y L V M R
 
AT4G11660.1     P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N D C F K R G E K I L L R D I Q R R K
Sb023593_Sorbi1    - - - - S R M L L Q S F F - - - - - - - - - - - - - - - - - - - I C P S - - - - - - - - - S R V S R A F S R - - R R R S
 
AT4G11660.1     I S Q P A M A A A A A A A A A A V A A S A V T V A A V P V V A H I V S P S N S G E E Q V I S S N S S P A A A A A A I G G
Sb023593_Sorbi1    F S S P V S P D A E A P P E A P D A A A C G W S S A D P E L - - - - - - - - - - D E R T C S S V E S A G E A G R V T G S
 
AT4G11660.1     V V G G G S L Q R T T S C T T A P E - - - - - - - - - - - - - L V E E N E R L R K D N E R L R K E M T K L K G L Y A N I
Sb023593_Sorbi1    A M G I G A - - - - A A T V T A P D A A A A A A V A S P A T G V A G A S A T L R R C M S Q R R R F S P R R K K S L A N S
 
AT4G11660.1     Y T L M A N F T P G Q E D C A H L L P E G K P L D L L P E R Q E M S E A I M A S E I E T G I G L K L G E D L T P R - - -
Sb023593_Sorbi1    H R S G T I F V - G V E - L P H E A G E V V V L E I L G E E - - - - - - - V A R E L R R P P H H E R G P V V V P R D H V
 
AT4G11660.1     - - - - - - - - L F G V S I G V K R A R R E E E L G A A E E E D D D R R E A A A Q E G E Q S S D V K A E P M E E N N S G
Sb023593_Sorbi1    V H R R V V H Q L - - V R L G Q E R - R R Q R P L P G R V R S K R W R R - - - G R R W R R R S G V A A - - - - - - - N G
 
AT4G11660.1     N H N G S W L E L G K - - - - - - - - - - - - - - -
Sb023593_Sorbi1    L P G G G A A L L G H L A S A R S P A G S K P A K P
 
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