fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011455 not found in 303aa AT4G22810.1 1st_not 0.601307189 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12050.1     MDPVQSHGSQSSLPPPFHARDFQLHLQQQQQHQQQHQQQQQQQFFLHHHQQPQRNLDQDH
pt011455_POPTR_ MDPVTAHG--HSLPPPFHTRDFQLH---------HHQQQQQHQF---HHQQQQNSED---
                **** :**   *******:******         :******:**   **** *.. *   

AT4G12050.1     EQQGGSI-LNRSIKMDREETSDNMDNIANTNSGSEGKEMSLHGGEGGSGGGGSGEQMTRR
pt011455_POPTR_ EQSGSSSGLNKSLKRERDENNNSMGN-------SEGKELI-------TSGSGEGE-ITRR
                **.*.*  **:*:* :*:*..:.*.*       *****:        :.*.*.** :***

AT4G12050.1     PRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGT
pt011455_POPTR_ PRGRPSGSKNKPKPPIIITRDSANALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGT
                *****:*******.***************:**:.******:.:************:****

AT4G12050.1     GSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVVGG
pt011455_POPTR_ GTVTNVTLRQPAS-PGAIVTLHGRFEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGG
                *:*****:***.* **::*:**********:***************::************

AT4G12050.1     SVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGGGGGGMGSPPMMG--
pt011455_POPTR_ SVVGTLTASGPVVIMAASFSNAAYERLPLEEEDPQMPMQ--------GGEMGSPGAVGQQ
                ****.* .*****:*****************:: * *:*        ** ****  :*  

AT4G12050.1     -----QQQAMAAMAAA--QGLPPNLLGSVQLPPPQQNDQQYWSTGRPPY
pt011455_POPTR_ QQQPQQQQVMAEQNAQLFHGLPPNLLNSIQLPA-----EAYWATGRPPY
                     ***.**   *   :*******.*:***.     : **:******
BoxShade v3.31 C (beta, 970507) Output
AT4G12050.1     M D P V Q S H G S Q S S L P P P F H A R D F Q L H L Q Q Q Q Q H Q Q Q H Q Q Q Q Q Q Q F F L H H H Q Q P Q R N L D Q D H
pt011455_POPTR_    M D P V T A H G - - H S L P P P F H T R D F Q L H - - - - - - - - - H H Q Q Q Q Q H Q F - - - H H Q Q Q Q N S E D - - -
 
AT4G12050.1     E Q Q G G S I - L N R S I K M D R E E T S D N M D N I A N T N S G S E G K E M S L H G G E G G S G G G G S G E Q M T R R
pt011455_POPTR_    E Q S G S S S G L N K S L K R E R D E N N N S M G N - - - - - - - S E G K E L I - - - - - - - T S G S G E G E - I T R R
 
AT4G12050.1     P R G R P A G S K N K P K A P I I I T R D S A N A L R T H V M E I G D G C D I V D C M A T F A R R R Q R G V C V M S G T
pt011455_POPTR_    P R G R P S G S K N K P K P P I I I T R D S A N A L R T H L M E V A D G C D I V E S V A T F A R R R Q R G V C I M S G T
 
AT4G12050.1     G S V T N V T I R Q P G S P P G S V V S L H G R F E I L S L S G S F L P P P A P P A A T G L S V Y L A G G Q G Q V V G G
pt011455_POPTR_    G T V T N V T L R Q P A S - P G A I V T L H G R F E I L S L A G S F L P P P A P P A A T G L T I Y L A G G Q G Q V V G G
 
AT4G12050.1     S V V G P L L C S G P V V V M A A S F S N A A Y E R L P L E E D E M Q T P V Q G G G G G G G G G G G M G S P P M M G - -
pt011455_POPTR_    S V V G T L T A S G P V V I M A A S F S N A A Y E R L P L E E E D P Q M P M Q - - - - - - - - G G E M G S P G A V G Q Q
 
AT4G12050.1     - - - - - Q Q Q A M A A M A A A - - Q G L P P N L L G S V Q L P P P Q Q N D Q Q Y W S T G R P P Y
pt011455_POPTR_    Q Q Q P Q Q Q Q V M A E Q N A Q L F H G L P P N L L N S I Q L P A - - - - - E A Y W A T G R P P Y
 
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