fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os007705 not found in 316aa AT4G22810.1 1st_not 0.505446623 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12050.1     MDPVQS--HGSQSSLPPPFHARDFQLHLQQQQQHQQQHQQQQQQQFFLHHHQQPQRNLDQ
Os007705_Os02t0 MDPVTASIHGHH--LPPPFNTRDFHHHLQ-----QQQHQ--------LH--------LKT
                **** :  ** :  *****::***: ***     *****        **        *. 

AT4G12050.1     DHEQQGGS---ILNRSIKMDREETSDNMDNIANTN-SGSEGKEMSLHGGEGGSGGGGSGE
Os007705_Os02t0 EDDQGGGTPGVFGSRGTKRDH----DDDENSGNGHGSGGDGGDLALVPPSGGGPDGAGSE
                :.:* **:   : .*. * *:    *: :* .* : **.:* :::*   .**. .*...*

AT4G12050.1     QMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVC
Os007705_Os02t0 SATRRPRGRPAGSKNKPKPPIIITRDSANTLRTHVMEVAGGCDISESITTFARRRQRGVC
                . ****************.**********:*******:..**** :.::***********

AT4G12050.1     VMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQG
Os007705_Os02t0 VLSGAGTVTNVTLRQPAS-QGAVVALHGRFEILSLSGSFLPPPAPPEATGLTVYLAGGQG
                *:**:*:*****:***.*  *:**:********************* ****:********

AT4G12050.1     QVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGGGGGGMGSPP
Os007705_Os02t0 QVVGGSVVGALTAAGPVVIMAASFANAVYERLPLEDDEL-LAAQGQADSAGLLAA-----
                *********.* .:****:*****:**.*******:**:  ..** ....*  ..     

AT4G12050.1     MMGQQQAMAAMAAA-----QGLPPNLLGSVQLPPPQQNDQQY-WST----GRP-PY
Os007705_Os02t0 --GQQAAQLAGGAVDPSLFQGLPPNLLGNVQLPP----EAAYGWNPGAGGGRPAPF
                  *** *  * .*.     *********.*****    :  * *..    *** *:
BoxShade v3.31 C (beta, 970507) Output
AT4G12050.1     M D P V Q S - - H G S Q S S L P P P F H A R D F Q L H L Q Q Q Q Q H Q Q Q H Q Q Q Q Q Q Q F F L H H H Q Q P Q R N L D Q
Os007705_Os02t0    M D P V T A S I H G H H - - L P P P F N T R D F H H H L Q - - - - - Q Q Q H Q - - - - - - - - L H - - - - - - - - L K T
 
AT4G12050.1     D H E Q Q G G S - - - I L N R S I K M D R E E T S D N M D N I A N T N - S G S E G K E M S L H G G E G G S G G G G S G E
Os007705_Os02t0    E D D Q G G G T P G V F G S R G T K R D H - - - - D D D E N S G N G H G S G G D G G D L A L V P P S G G G P D G A G S E
 
AT4G12050.1     Q M T R R P R G R P A G S K N K P K A P I I I T R D S A N A L R T H V M E I G D G C D I V D C M A T F A R R R Q R G V C
Os007705_Os02t0    S A T R R P R G R P A G S K N K P K P P I I I T R D S A N T L R T H V M E V A G G C D I S E S I T T F A R R R Q R G V C
 
AT4G12050.1     V M S G T G S V T N V T I R Q P G S P P G S V V S L H G R F E I L S L S G S F L P P P A P P A A T G L S V Y L A G G Q G
Os007705_Os02t0    V L S G A G T V T N V T L R Q P A S - Q G A V V A L H G R F E I L S L S G S F L P P P A P P E A T G L T V Y L A G G Q G
 
AT4G12050.1     Q V V G G S V V G P L L C S G P V V V M A A S F S N A A Y E R L P L E E D E M Q T P V Q G G G G G G G G G G G M G S P P
Os007705_Os02t0    Q V V G G S V V G A L T A A G P V V I M A A S F A N A V Y E R L P L E D D E L - L A A Q G Q A D S A G L L A A - - - - -
 
AT4G12050.1     M M G Q Q Q A M A A M A A A - - - - - Q G L P P N L L G S V Q L P P P Q Q N D Q Q Y - W S T - - - - G R P - P Y
Os007705_Os02t0    - - G Q Q A A Q L A G G A V D P S L F Q G L P P N L L G N V Q L P P - - - - E A A Y G W N P G A G G G R P A P F
 
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