fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027062 not found in 595aa AT2G45430.1 1st_not 0.503267973 II
Sb021820 not found in 440aa AT4G12050.1 not_1st 0.400871459 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12050.1     ------------------MD-----------------------PVQSHG--------SQS
Sb021820_Sorbi1 LRDYCLLIISPRVVFIYGYE----NS-----RAGKSVAGRQC-GGRGDG--EPRRPLAAA
Sb027062_Sorbi1 --DNLLINMRNHMQFRRKFDLHDTNSSKRWKKRAKSLNHLSCVCVRADQLLERRRTATGG
                                   :                         :..         : .

AT4G12050.1     SLPPPFHARDFQLHLQQQQQHQQQHQ----------------------------------
Sb021820_Sorbi1 GPSPRLRPLPRRRGPRQQRQQQQRRGRRVAPACRRRGGGR-------RRSSPAAG-----
Sb027062_Sorbi1 ARVPSVGCFWRQLHVAEQVRRQSLEEAWIHSA----GGGELRRLLRTRENSCTVGLCLCS
                .  * .     :    :* ::*. .                                   

AT4G12050.1     ------QQQ-----------------------QQQFFLHHHQ-----QPQRNLDQDHEQQ
Sb021820_Sorbi1 -EAPGVQEQAEAAGGGDAGEPQRDALPRAGDRQRRRHRGRHRGLLPPPPARRLRAQRDRR
Sb027062_Sorbi1 EHVILLQRQPLVHGVGE-----------------RRCHYHHR------PSRRERAD-DAA
                      *.*                         :    :*:      * *.   : :  

AT4G12050.1     GGSILNRSIKMDREETSDNMDNIANTNS-GSEGKEM------------SLHGGEGGSGGG
Sb021820_Sorbi1 GHQRHAAA-----------------ARG-GRRGGHRAAWPVRDTVHVRGVPPGAGAAGGH
Sb027062_Sorbi1 AHHLPLPAGKVD-----------GEARGFGRRGRREERAGEGEDLEA-AVESDDGALGG-
                .      :                 :.. * .* .             .:  . *. ** 

AT4G12050.1     GSGEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCD---IVDCMATFAR
Sb021820_Sorbi1 GA----RRVPGGR----------------------------AGAGGG------------R
Sb027062_Sorbi1 -------RLPQGD----------------------------VGDGAGAAEDADPALPAAR
                       * * *                              * * .            *

AT4G12050.1     RRQRGVCVMSGTGSVTNVTI-------------RQPGSPPGSVVSLHGRFEILSLSGSFL
Sb021820_Sorbi1 ERH---------GGAHRVGPRHGDRRHVRQRHLREAAAGAGRR---GGRRALRVVRGRRH
Sb027062_Sorbi1 ERRDALGDVAAPGHLHDVRP-------------ERVGAVPGDD---DGR--LRLVLGPRR
                .*:         *    *               .. .: .*      **  :  : *   

AT4G12050.1     PPPAPPAATGL-------SVYLAGGQGQVVG--GSVVGPLLCSGPVVVM----AASFSNA
Sb021820_Sorbi1 -----RAAAGA-------AAEQRGPRRAAVVHVRRPAD--------------------AA
Sb027062_Sorbi1 P--APRAARGAVSSAVWPAATRRGNQRQLVASTAAAATPVAVSAVLVIMLVVVALDVAAG
                      ** *        :.   * :   *      .                      .

AT4G12050.1     AYERLPLEEDEMQTPVQGGGGGGGGGGGMGSPPMMGQQQAMAAMAAAQGLPPNLLGSVQL
Sb021820_Sorbi1 ARHVRPV----------------------------GARGCDAATADVV------------
Sb027062_Sorbi1 AEHPWP-----------------------------------AATMVVLGLELQLVMLLLL
                * .  *                                   **   .             

AT4G12050.1     PPPQQNDQ----QYW---------STGRPPY------
Sb021820_Sorbi1 -----------------LASASCTCTGLPPYLSTSC-
Sb027062_Sorbi1 LLLEMVMEVAGVEWWRKMVTVYGCCDRIHPLTGRIAN
                                        .    *
BoxShade v3.31 C (beta, 970507) Output
AT4G12050.1     - - - - - - - - - - - - - - - - - - M D - - - - - - - - - - - - - - - - - - - - - - - P V Q S H G - - - - - - - - S Q S
Sb021820_Sorbi1    L R D Y C L L I I S P R V V F I Y G Y E - - - - N S - - - - - R A G K S V A G R Q C - G G R G D G - - E P R R P L A A A
Sb027062_Sorbi1    - - D N L L I N M R N H M Q F R R K F D L H D T N S S K R W K K R A K S L N H L S C V C V R A D Q L L E R R R T A T G G
 
AT4G12050.1     S L P P P F H A R D F Q L H L Q Q Q Q Q H Q Q Q H Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb021820_Sorbi1    G P S P R L R P L P R R R G P R Q Q R Q Q Q Q R R G R R V A P A C R R R G G G R - - - - - - - R R S S P A A G - - - - -
Sb027062_Sorbi1    A R V P S V G C F W R Q L H V A E Q V R R Q S L E E A W I H S A - - - - G G G E L R R L L R T R E N S C T V G L C L C S
 
AT4G12050.1     - - - - - - Q Q Q - - - - - - - - - - - - - - - - - - - - - - - Q Q Q F F L H H H Q - - - - - Q P Q R N L D Q D H E Q Q
Sb021820_Sorbi1    - E A P G V Q E Q A E A A G G G D A G E P Q R D A L P R A G D R Q R R R H R G R H R G L L P P P P A R R L R A Q R D R R
Sb027062_Sorbi1    E H V I L L Q R Q P L V H G V G E - - - - - - - - - - - - - - - - - R R C H Y H H R - - - - - - P S R R E R A D - D A A
 
AT4G12050.1     G G S I L N R S I K M D R E E T S D N M D N I A N T N S - G S E G K E M - - - - - - - - - - - - S L H G G E G G S G G G
Sb021820_Sorbi1    G H Q R H A A A - - - - - - - - - - - - - - - - - A R G - G R R G G H R A A W P V R D T V H V R G V P P G A G A A G G H
Sb027062_Sorbi1    A H H L P L P A G K V D - - - - - - - - - - - G E A R G F G R R G R R E E R A G E G E D L E A - A V E S D D G A L G G -
 
AT4G12050.1     G S G E Q M T R R P R G R P A G S K N K P K A P I I I T R D S A N A L R T H V M E I G D G C D - - - I V D C M A T F A R
Sb021820_Sorbi1    G A - - - - R R V P G G R - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G A G G G - - - - - - - - - - - - R
Sb027062_Sorbi1    - - - - - - - R L P Q G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - V G D G A G A A E D A D P A L P A A R
 
AT4G12050.1     R R Q R G V C V M S G T G S V T N V T I - - - - - - - - - - - - - R Q P G S P P G S V V S L H G R F E I L S L S G S F L
Sb021820_Sorbi1    E R H - - - - - - - - - G G A H R V G P R H G D R R H V R Q R H L R E A A A G A G R R - - - G G R R A L R V V R G R R H
Sb027062_Sorbi1    E R R D A L G D V A A P G H L H D V R P - - - - - - - - - - - - - E R V G A V P G D D - - - D G R - - L R L V L G P R R
 
AT4G12050.1     P P P A P P A A T G L - - - - - - - S V Y L A G G Q G Q V V G - - G S V V G P L L C S G P V V V M - - - - A A S F S N A
Sb021820_Sorbi1    - - - - - R A A A G A - - - - - - - A A E Q R G P R R A A V V H V R R P A D - - - - - - - - - - - - - - - - - - - - A A
Sb027062_Sorbi1    P - - A P R A A R G A V S S A V W P A A T R R G N Q R Q L V A S T A A A A T P V A V S A V L V I M L V V V A L D V A A G
 
AT4G12050.1     A Y E R L P L E E D E M Q T P V Q G G G G G G G G G G G M G S P P M M G Q Q Q A M A A M A A A Q G L P P N L L G S V Q L
Sb021820_Sorbi1    A R H V R P V - - - - - - - - - - - - - - - - - - - - - - - - - - - - G A R G C D A A T A D V V - - - - - - - - - - - -
Sb027062_Sorbi1    A E H P W P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A A T M V V L G L E L Q L V M L L L L
 
AT4G12050.1     P P P Q Q N D Q - - - - Q Y W - - - - - - - - - S T G R P P Y - - - - - -
Sb021820_Sorbi1    - - - - - - - - - - - - - - - - - L A S A S C T C T G L P P Y L S T S C -
Sb027062_Sorbi1    L L L E M V M E V A G V E W W R K M V T V Y G C C D R I H P L T G R I A N
 
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