fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029863 not found in 559aa AT4G17800.1 not_not 0.437908496 III
Sb033333 not found in 547aa AT4G22810.1 not_not 0.422657952 III
Sb010951 not found in 328aa AT4G35390.1 not_not 0.407407407 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12050.1     ------------------MDPVQSHGSQSSLPP-PFHARDF-------------------
Sb033333_Sorbi1 PAAPSSIGTNARSLARPCARPRTRVAGRATMDPAVAAAAAHGGGHHFAQPVAPFHHPFGG
Sb029863_Sorbi1 ------------------------QKSMAGLDL-GTAATRY------------VHQL---
Sb010951_Sorbi1 ---------------------------MPGMDPGGGGSSRY------------FHQL---
                                            . :      :  .                   

AT4G12050.1     ----QLHLQQQQQHQQ----QHQQQQQQQFFLHHHQQPQRNLDQDHEQQGGSILNRSIKM
Sb033333_Sorbi1 LGGHHHHLFPGQQHPAF---QHFQEQQRQLEL--------------LGAGGGVPG---GV
Sb029863_Sorbi1 ---HHLHPDLQLQHS------------------YAKQPEPSEDDPHGSGGGG--------
Sb010951_Sorbi1 -----LRPQQQQQPSPLSPNSHVKMEH-----HHKMSPDKSPVGGEAEAGGS--------
                      :     *                                    **.        

AT4G12050.1     DREETSDNMDNIANT-NSGS-----EGKEMSLHGGEGGS--GGGGSGEQM-------TRR
Sb033333_Sorbi1 NKQELGVGGDDSNNTINSAGSNGSGDGA------VAGADQQAGGGDGDQQQQQHALVMRR
Sb029863_Sorbi1 ------------GNS-NNGGPYGEHDGGSSSSGPGAGDAPGGSGGNGEMV-------ARR
Sb010951_Sorbi1 ------------------GG--GGDQPSSSALVPVEGGS-GGGGGSGSGTP------TRR
                                  ..     :          *    ..**.*.          **

AT4G12050.1     PRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGT
Sb033333_Sorbi1 PRGRPAGSKNKPKPPVIITRDSASALRAHVLEVAAGCDVVDSIAGFARRRQVGVCVLSAS
Sb029863_Sorbi1 PRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFESVSTYARRRQRGVCVLSGS
Sb010951_Sorbi1 PRGRPPGSKNKPKPPIIVTRDSPNALHSHVLEVAAGADVVDCVAEYARRRGRGVCVLSGG
                *****.*******.*:*:**:*..:*::*::*:. *.*:.:.:: :****  ****:*. 

AT4G12050.1     GSVTNVTIRQPGS-PPGSVV-SLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVV
Sb033333_Sorbi1 GSVANVCIRHSGA-APGAVV-TMAGCFDILSLSGSFLPPPAPPAATGLTVYLSGGQGQVV
Sb029863_Sorbi1 GVVTNVTLRQPSA-PTGAVV-TLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVV
Sb010951_Sorbi1 GAVVNVALRQPGASPPGSMVATLRGRFEILSLTGTVLPPPAPPGASGLTVFLSGGQGQVI
                * *.** :*:..: ..*::* :: * *:****:*:.*******.*:.*:::*:******:

AT4G12050.1     GGSVVGPLLCSGPVVVMAASFSNAAYERLPL--EEDEMQTPVQG--------------G-
Sb033333_Sorbi1 GGTVAGPLLASGPVVIVAACFGNAAYERLPL--DDDE--------PPQQQLLQQALPPP-
Sb029863_Sorbi1 GGNVVGALYAAGPVIVIAASFANVAYERLPL--EEEEAQAAPPGLQMQ--------PPG-
Sb010951_Sorbi1 GGSVVGPLVAAGPVVLMAASFANAVYERLPLEGEEEETAAAAAGAEPQDQVAQSAGPPGQ
                **.*.*.* .:***:::**.*.*..******  :::*                       

AT4G12050.1     -----------GGGGGGGGGMGSPPMM--GQQQAMAAMAAAQGLP----P--NLL---GS
Sb033333_Sorbi1 -----------QGMAGASSSSPPPPLSLPGQH------PLADQLP------HSLM---NG
Sb029863_Sorbi1 -----------GGVDGAGGGMGGGP---------FPPDPSAAGLPFFNLPLNNMAG--GG
Sb010951_Sorbi1 QPTASQSSGVTGGGDAGGGGM----------------------------SLYNLAGNVGA
                            *  .....                                .:    ..

AT4G12050.1     VQLPPPQQNDQQYWS--TG-----RPPY
Sb033333_Sorbi1 LPLPA----DAYAWANPGGSGAGRVAPY
Sb029863_Sorbi1 SQLPPGA--DGHGWA--GA-----RPPF
Sb010951_Sorbi1 YQLPG---DNFGGWS--GGGGGGVRPPF
                  **     :   *:   .      .*:
BoxShade v3.31 C (beta, 970507) Output
AT4G12050.1     - - - - - - - - - - - - - - - - - - M D P V Q S H G S Q S S L P P - P F H A R D F - - - - - - - - - - - - - - - - - - -
Sb033333_Sorbi1    P A A P S S I G T N A R S L A R P C A R P R T R V A G R A T M D P A V A A A A A H G G G H H F A Q P V A P F H H P F G G
Sb029863_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - Q K S M A G L D L - G T A A T R Y - - - - - - - - - - - - V H Q L - - -
Sb010951_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - M P G M D P G G G G S S R Y - - - - - - - - - - - - F H Q L - - -
 
AT4G12050.1     - - - - Q L H L Q Q Q Q Q H Q Q - - - - Q H Q Q Q Q Q Q Q F F L H H H Q Q P Q R N L D Q D H E Q Q G G S I L N R S I K M
Sb033333_Sorbi1    L G G H H H H L F P G Q Q H P A F - - - Q H F Q E Q Q R Q L E L - - - - - - - - - - - - - - L G A G G G V P G - - - G V
Sb029863_Sorbi1    - - - H H L H P D L Q L Q H S - - - - - - - - - - - - - - - - - - Y A K Q P E P S E D D P H G S G G G G - - - - - - - -
Sb010951_Sorbi1    - - - - - L R P Q Q Q Q Q P S P L S P N S H V K M E H - - - - - H H K M S P D K S P V G G E A E A G G S - - - - - - - -
 
AT4G12050.1     D R E E T S D N M D N I A N T - N S G S - - - - - E G K E M S L H G G E G G S - - G G G G S G E Q M - - - - - - - T R R
Sb033333_Sorbi1    N K Q E L G V G G D D S N N T I N S A G S N G S G D G A - - - - - - V A G A D Q Q A G G G D G D Q Q Q Q Q H A L V M R R
Sb029863_Sorbi1    - - - - - - - - - - - - G N S - N N G G P Y G E H D G G S S S S G P G A G D A P G G S G G N G E M V - - - - - - - A R R
Sb010951_Sorbi1    - - - - - - - - - - - - - - - - - - G G - - G G D Q P S S S A L V P V E G G S - G G G G G S G S G T P - - - - - - T R R
 
AT4G12050.1     P R G R P A G S K N K P K A P I I I T R D S A N A L R T H V M E I G D G C D I V D C M A T F A R R R Q R G V C V M S G T
Sb033333_Sorbi1    P R G R P A G S K N K P K P P V I I T R D S A S A L R A H V L E V A A G C D V V D S I A G F A R R R Q V G V C V L S A S
Sb029863_Sorbi1    P R G R P P G S K N K P K P P V I I T R E S A N T L R A H I L E V G S G C D V F E S V S T Y A R R R Q R G V C V L S G S
Sb010951_Sorbi1    P R G R P P G S K N K P K P P I I V T R D S P N A L H S H V L E V A A G A D V V D C V A E Y A R R R G R G V C V L S G G
 
AT4G12050.1     G S V T N V T I R Q P G S - P P G S V V - S L H G R F E I L S L S G S F L P P P A P P A A T G L S V Y L A G G Q G Q V V
Sb033333_Sorbi1    G S V A N V C I R H S G A - A P G A V V - T M A G C F D I L S L S G S F L P P P A P P A A T G L T V Y L S G G Q G Q V V
Sb029863_Sorbi1    G V V T N V T L R Q P S A - P T G A V V - T L H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V
Sb010951_Sorbi1    G A V V N V A L R Q P G A S P P G S M V A T L R G R F E I L S L T G T V L P P P A P P G A S G L T V F L S G G Q G Q V I
 
AT4G12050.1     G G S V V G P L L C S G P V V V M A A S F S N A A Y E R L P L - - E E D E M Q T P V Q G - - - - - - - - - - - - - - G -
Sb033333_Sorbi1    G G T V A G P L L A S G P V V I V A A C F G N A A Y E R L P L - - D D D E - - - - - - - - P P Q Q Q L L Q Q A L P P P -
Sb029863_Sorbi1    G G N V V G A L Y A A G P V I V I A A S F A N V A Y E R L P L - - E E E E A Q A A P P G L Q M Q - - - - - - - - P P G -
Sb010951_Sorbi1    G G S V V G P L V A A G P V V L M A A S F A N A V Y E R L P L E G E E E E T A A A A A G A E P Q D Q V A Q S A G P P G Q
 
AT4G12050.1     - - - - - - - - - - - G G G G G G G G G M G S P P M M - - G Q Q Q A M A A M A A A Q G L P - - - - P - - N L L - - - G S
Sb033333_Sorbi1    - - - - - - - - - - - Q G M A G A S S S S P P P P L S L P G Q H - - - - - - P L A D Q L P - - - - - - H S L M - - - N G
Sb029863_Sorbi1    - - - - - - - - - - - G G V D G A G G G M G G G P - - - - - - - - - F P P D P S A A G L P F F N L P L N N M A G - - G G
Sb010951_Sorbi1    Q P T A S Q S S G V T G G G D A G G G G M - - - - - - - - - - - - - - - - - - - - - - - - - - - - S L Y N L A G N V G A
 
AT4G12050.1     V Q L P P P Q Q N D Q Q Y W S - - T G - - - - - R P P Y
Sb033333_Sorbi1    L P L P A - - - - D A Y A W A N P G G S G A G R V A P Y
Sb029863_Sorbi1    S Q L P P G A - - D G H G W A - - G A - - - - - R P P F
Sb010951_Sorbi1    Y Q L P G - - - D N F G G W S - - G G G G G G V R P P F
 
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