fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002179 not found in 300aa AT4G22810.1 1st_not 0.527233115 II
Gm011358 not found in 283aa AT4G12050.1 not_1st 0.518518518 II
Gm011357 not found in 283aa AT4G12050.1 not_1st 0.518518518 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12050.1     MDPVQSHGSQSSLPPPFHA-RDFQLHLQQQQQHQQQHQQQQQQQFFLHHHQQPQRNLDQD
gm011358_Glyma0 MDPISAHG--HSLPPPFHT-RDLHLHH-QQQQHQFQSLNQA-----------------TE
gm011357_Glyma0 MDPISAHG--HSLPPPFHT-RDLHLHH-QQQQHQFQSLNQA-----------------TE
gm002179_Glyma0 MDPITAHG--HSLPPPFHAGRDLHLH---QQQHQFHSLQ--------------------E
                ***: :**   *******: **::**   ***** :  :                    :

AT4G12050.1     HEQQGGSI-LNRSIKMDREETSDNMDNIANTNSGSEGKEMSLHGGEGGSGGGGSGE-QMT
gm011358_Glyma0 DENSGSSG----AQKREREENSNN-----NE---------------------GAGEAEIT
gm011357_Glyma0 DENSGSSG----AQKREREENSNN-----NE---------------------GAGEAEIT
gm002179_Glyma0 DEQSGSSGGLNLAHKREHEENNNN-----NSSDGKEG------------GGAGSGETEIS
                .*:.*.*     : * ::**..:*     *                      *:** :::

AT4G12050.1     RRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMS
gm011358_Glyma0 RRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGCDIVESVSEFARKRQRGVCIMS
gm011357_Glyma0 RRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGCDIVESVSEFARKRQRGVCIMS
gm002179_Glyma0 RRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVDSVSAFARRRQRGVCIMS
                ***************.***********::**:**:.******:.:: ***:******:**

AT4G12050.1     GTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVV
gm011358_Glyma0 GTGTVNNVTLRQPAS-SGSVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVV
gm011357_Glyma0 GTGTVNNVTLRQPAS-SGSVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVV
gm002179_Glyma0 GTGTVTNVTLRQPAS-SGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVV
                ***:*.***:***.* .*:**:**********:************:**::**********

AT4G12050.1     GGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQGGG------GGGGGGGGMG
gm011358_Glyma0 GGSVVGTLVASGPVVIMAASFSNAAYERLPLEDEDPSLQMQ-GGSIGSP-----GASGVG
gm011357_Glyma0 GGSVVGTLVASGPVVIMAASFSNAAYERLPLEDEDPSLQMQ-GGSIGSP-----GASGVG
gm002179_Glyma0 GGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPSMALQGGGSIGSPGGGGGGGGGVG
                ******.*:.*****:*:**************::: .  :* **          *..*:*

AT4G12050.1     SPPMMGQQQAMAAMAAA---QGLPPNLLGSVQLPPPQQNDQQYW-STGRPPY
gm011358_Glyma0 Q------SQLLGGDATAPLFHGLPPNLLNSVQMP-----SEPFWAASARPPF
gm011357_Glyma0 Q------SQLLGGDATAPLFHGLPPNLLNSVQMP-----SEPFWAASARPPF
gm002179_Glyma0 QQQ---PSQQLMGDSTAPLFHGLNPNLLNSVQMP-----SETFW-ATGRSPY
                .      .* : . ::*   :** ****.***:*     .: :* ::.*.*:
BoxShade v3.31 C (beta, 970507) Output
AT4G12050.1     M D P V Q S H G S Q S S L P P P F H A - R D F Q L H L Q Q Q Q Q H Q Q Q H Q Q Q Q Q Q Q F F L H H H Q Q P Q R N L D Q D
gm011358_Glyma0    M D P I S A H G - - H S L P P P F H T - R D L H L H H - Q Q Q Q H Q F Q S L N Q A - - - - - - - - - - - - - - - - - T E
gm011357_Glyma0    M D P I S A H G - - H S L P P P F H T - R D L H L H H - Q Q Q Q H Q F Q S L N Q A - - - - - - - - - - - - - - - - - T E
gm002179_Glyma0    M D P I T A H G - - H S L P P P F H A G R D L H L H - - - Q Q Q H Q F H S L Q - - - - - - - - - - - - - - - - - - - - E
 
AT4G12050.1     H E Q Q G G S I - L N R S I K M D R E E T S D N M D N I A N T N S G S E G K E M S L H G G E G G S G G G G S G E - Q M T
gm011358_Glyma0    D E N S G S S G - - - - A Q K R E R E E N S N N - - - - - N E - - - - - - - - - - - - - - - - - - - - - G A G E A E I T
gm011357_Glyma0    D E N S G S S G - - - - A Q K R E R E E N S N N - - - - - N E - - - - - - - - - - - - - - - - - - - - - G A G E A E I T
gm002179_Glyma0    D E Q S G S S G G L N L A H K R E H E E N N N N - - - - - N S S D G K E G - - - - - - - - - - - - G G A G S G E T E I S
 
AT4G12050.1     R R P R G R P A G S K N K P K A P I I I T R D S A N A L R T H V M E I G D G C D I V D C M A T F A R R R Q R G V C V M S
gm011358_Glyma0    R R P R G R P A G S K N K P K P P I I I T R D S A N A M R T H M M E V A D G C D I V E S V S E F A R K R Q R G V C I M S
gm011357_Glyma0    R R P R G R P A G S K N K P K P P I I I T R D S A N A M R T H M M E V A D G C D I V E S V S E F A R K R Q R G V C I M S
gm002179_Glyma0    R R P R G R P A G S K N K P K P P I I I T R D S A N A L K T H V M E V A D G C D I V D S V S A F A R R R Q R G V C I M S
 
AT4G12050.1     G T G S V T N V T I R Q P G S P P G S V V S L H G R F E I L S L S G S F L P P P A P P A A T G L S V Y L A G G Q G Q V V
gm011358_Glyma0    G T G T V N N V T L R Q P A S - S G S V V T L H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V
gm011357_Glyma0    G T G T V N N V T L R Q P A S - S G S V V T L H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V
gm002179_Glyma0    G T G T V T N V T L R Q P A S - S G A V V T L H G R F E I L S L A G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V
 
AT4G12050.1     G G S V V G P L L C S G P V V V M A A S F S N A A Y E R L P L E E D E M Q T P V Q G G G - - - - - - G G G G G G G G M G
gm011358_Glyma0    G G S V V G T L V A S G P V V I M A A S F S N A A Y E R L P L E D E D P S L Q M Q - G G S I G S P - - - - - G A S G V G
gm011357_Glyma0    G G S V V G T L V A S G P V V I M A A S F S N A A Y E R L P L E D E D P S L Q M Q - G G S I G S P - - - - - G A S G V G
gm002179_Glyma0    G G S V V G A L I A S G P V V I M S A S F S N A A Y E R L P L E D E D P S M A L Q G G G S I G S P G G G G G G G G G V G
 
AT4G12050.1     S P P M M G Q Q Q A M A A M A A A - - - Q G L P P N L L G S V Q L P P P Q Q N D Q Q Y W - S T G R P P Y
gm011358_Glyma0    Q - - - - - - S Q L L G G D A T A P L F H G L P P N L L N S V Q M P - - - - - S E P F W A A S A R P P F
gm011357_Glyma0    Q - - - - - - S Q L L G G D A T A P L F H G L P P N L L N S V Q M P - - - - - S E P F W A A S A R P P F
gm002179_Glyma0    Q Q Q - - - P S Q Q L M G D S T A P L F H G L N P N L L N S V Q M P - - - - - S E T F W - A T G R S P Y
 
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