fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047004 not found in 327aa AT4G12080.1 1st_1st 0.542016806 Ia
Pt011216 not found in 332aa AT4G12080.1 1st_1st 0.470588235 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12080.1     MVLNMESTGEAVRSTTGN-DGGITVVRSDAPSDFHVAQRSE-SSNQSPTSVTPPPPQPSS
gm047004_Glyma1 ----MET--------SGGVSGGVTLVGSDAPSDYHVAPRTD-NPAPASGSTTQIPATAGS
pt011216_POPTR_ ----METTVSSKSSNSGG--AGVTVVASDAPSNYQIAPRSDSNPNSTPGSAPPAPPQA--
                    **:        :*.  .*:*:* *****::::* *:: ..  :. *..  *. .  

AT4G12080.1     HHTAPPPLQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGPDGTV-VALSPKPISSAPA
gm047004_Glyma1 --VPPSPHPPHTAAMEAYPAKMP------AKKKRGRPRKYAPDGSVTMALSPKPISSS-A
pt011216_POPTR_ ----PPPHPSPAA------ATMP------LKKKRGRPRKYGPDGSVTMALSPKPISSA-A
                    *.*    :.      * *        **********.***:* :*********: *

AT4G12080.1     PSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYH-------HQVENLGEWAPCSVGGNF
gm047004_Glyma1 PL--PP----VIDFS-SEKRGKIKPTSSVSKAK---------FELENLGEWVACSVGANF
pt011216_POPTR_ PAPSPP----VIDFS-VVKQKKIKP---VSKAKISVSWLLMLWQFDLLGEWVACSVGANF
                *   **    *****   *: *:**   ..::*          :.: ****..****.**

AT4G12080.1     TPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEI
gm047004_Glyma1 TPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEI
pt011216_POPTR_ TPHIITVNAGEDVTMKIISFSQQGPRAICVLSANGVISSVTLRQPDSSGGTLTYEGRFEI
                ********:*******:*********:**:******************************

AT4G12080.1     LSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQ-VVVGSFLAGT
gm047004_Glyma1 LSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQ-VVVGSFLAGN
pt011216_POPTR_ LSLSGSFMPTETGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVVGSFLAGN
                *********.::******:******************:*********** *********.

AT4G12080.1     DHQDQKPKKNKHDFMLSS-PTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKH
gm047004_Glyma1 QHE-QKPRKQRHEVITSVIPAAVVPIST-LDPVPILSAAS-SIRNDNW-SAMPAEAKNKP
pt011216_POPTR_ QHE-QKPKKQKHDSLSGVMPTAAIPISI-ADPKSNFS-SP-SFRGDSW-SPLPPESRNKP
                :*: ***:*::*: : .  *:*.:***   *  .  * :. ....:.* :.:..:.:** 

AT4G12080.1     TDINVNVT--
gm047004_Glyma1 ADINVSLPAG
pt011216_POPTR_ ADINLTLPAG
                :***:.:.
BoxShade v3.31 C (beta, 970507) Output
AT4G12080.1     M V L N M E S T G E A V R S T T G N - D G G I T V V R S D A P S D F H V A Q R S E - S S N Q S P T S V T P P P P Q P S S
gm047004_Glyma1    - - - - M E T - - - - - - - - S G G V S G G V T L V G S D A P S D Y H V A P R T D - N P A P A S G S T T Q I P A T A G S
pt011216_POPTR_    - - - - M E T T V S S K S S N S G G - - A G V T V V A S D A P S N Y Q I A P R S D S N P N S T P G S A P P A P P Q A - -
 
AT4G12080.1     H H T A P P P L Q I S T V T T T T T T A A M E G I S G G L M K K K R G R P R K Y G P D G T V - V A L S P K P I S S A P A
gm047004_Glyma1    - - V P P S P H P P H T A A M E A Y P A K M P - - - - - - A K K K R G R P R K Y A P D G S V T M A L S P K P I S S S - A
pt011216_POPTR_    - - - - P P P H P S P A A - - - - - - A T M P - - - - - - L K K K R G R P R K Y G P D G S V T M A L S P K P I S S A - A
 
AT4G12080.1     P S H L P P P S S H V I D F S A S E K R S K V K P T N S F N R T K Y H - - - - - - - H Q V E N L G E W A P C S V G G N F
gm047004_Glyma1    P L - - P P - - - - V I D F S - S E K R G K I K P T S S V S K A K - - - - - - - - - F E L E N L G E W V A C S V G A N F
pt011216_POPTR_    P A P S P P - - - - V I D F S - V V K Q K K I K P - - - V S K A K I S V S W L L M L W Q F D L L G E W V A C S V G A N F
 
AT4G12080.1     T P H I I T V N T G E D V T M K I I S F S Q Q G P R S I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I
gm047004_Glyma1    T P H I I T V N S G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I
pt011216_POPTR_    T P H I I T V N A G E D V T M K I I S F S Q Q G P R A I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I
 
AT4G12080.1     L S L S G S F M P N D S G G T R S R T G G M S V S L A S P D G R V V G G G L A G L L V A A S P V Q - V V V G S F L A G T
gm047004_Glyma1    L S L S G S F M P S E S G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q - V V V G S F L A G N
pt011216_POPTR_    L S L S G S F M P T E T G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V V G S F L A G N
 
AT4G12080.1     D H Q D Q K P K K N K H D F M L S S - P T A A I P I S S A A D H R T I H S V S S L P V N N N T W Q T S L A S D P R N K H
gm047004_Glyma1    Q H E - Q K P R K Q R H E V I T S V I P A A V V P I S T - L D P V P I L S A A S - S I R N D N W - S A M P A E A K N K P
pt011216_POPTR_    Q H E - Q K P K K Q K H D S L S G V M P T A A I P I S I - A D P K S N F S - S P - S F R G D S W - S P L P P E S R N K P
 
AT4G12080.1     T D I N V N V T - -
gm047004_Glyma1    A D I N V S L P A G
pt011216_POPTR_    A D I N L T L P A G
 
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