fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016418 not found in 324aa AT4G12080.1 not_1st 0.460084033 II
Pt039991 not found in 325aa AT4G12080.1 not_1st 0.460084033 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12080.1     MVLNMESTGEAVRSTTGNDG---GITVVRSDAPSDFHVAQRSESSNQ---SPTSVTPPPP
pt016418_POPTR_ ----ME----------GREGLSSGVTVIGAEAPSTYHMAPRTENPGQIVVSPPAVEVPP-
pt039991_POPTR_ ----ME----------GREGLSAGVTVIGAEAPSNYHVAPRTENPGQFVVSPPAVEVPP-
                    **          *.:*   *:**: ::*** :*:* *:*...*   **.:*  ** 

AT4G12080.1     QPSSHHTAPPPLQISTVTTTTTTAAMEGISGGLM-KKKRGRPRKYGPDGTVV-ALSPKPI
pt016418_POPTR_ ------------------------VGAGLIGGTAEKKKRGRPRKYGPDGAVARALSPMPI
pt039991_POPTR_ ------------------------VGAGLTGGTTEKKKRGRPRKYGPDGAVARALSPMPI
                                        .  *: **   **************:*. **** **

AT4G12080.1     S-SAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQ-VENLGEWAPCSVGGNF
pt016418_POPTR_ SASAPHTGG---------DYSAG-KPGKVWP-GSYEKKKYKKMGMENLGEWAANSVGTNF
pt039991_POPTR_ SASAPSPGG---------DYSAG-KPGKVWP-GSYEKKKYKKLGMENLGEWAANSVGTNF
                * *** ..          *:**. * .** * .*:::.**::  :*******. *** **

AT4G12080.1     TPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEI
pt016418_POPTR_ TPHVITVNAGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEI
pt039991_POPTR_ TPHVITVNAGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEI
                ***:****:*******:*********:**:********.*********************

AT4G12080.1     LSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTD
pt016418_POPTR_ LSLSGSFMPTEIQGTRSRSGGMSVSLASPDGRVVGGSVAGLLVAASPVQVVVGSFLPG-N
pt039991_POPTR_ LSLSGSFMPTESQGTRSRSGGMSVSLASPDGRVVGGSVAGLLVAASPVQVVVGSFLAG-N
                *********.:  *****:*****************.:******************.* :

AT4G12080.1     HQDQKPKKNKHDFMLSS--PTAAIPISSAADHRTIH-----SVSSLPVNNNTWQTSLA-S
pt016418_POPTR_ HQEQKPKKPKIDSIPATFAPAPAIPASIAEREESAGTPQG-QQNSSPFQRENWATMHSMQ
pt039991_POPTR_ HQDQKPKKPKIDSIPATFAPAPVIPVSIAEREESVGTPHGQQQNSSSFQRENWATMHSMQ
                **:***** * * : ::  *:..** * *  ..:       . .* ..:.:.* *  : .

AT4G12080.1     DPRNKHTDINVNVT--
pt016418_POPTR_ DVRNSGTDINISLPEG
pt039991_POPTR_ DVRNSVTDINISLPEG
                * **. ****:.:.
BoxShade v3.31 C (beta, 970507) Output
AT4G12080.1     M V L N M E S T G E A V R S T T G N D G - - - G I T V V R S D A P S D F H V A Q R S E S S N Q - - - S P T S V T P P P P
pt016418_POPTR_    - - - - M E - - - - - - - - - - G R E G L S S G V T V I G A E A P S T Y H M A P R T E N P G Q I V V S P P A V E V P P -
pt039991_POPTR_    - - - - M E - - - - - - - - - - G R E G L S A G V T V I G A E A P S N Y H V A P R T E N P G Q F V V S P P A V E V P P -
 
AT4G12080.1     Q P S S H H T A P P P L Q I S T V T T T T T T A A M E G I S G G L M - K K K R G R P R K Y G P D G T V V - A L S P K P I
pt016418_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - V G A G L I G G T A E K K K R G R P R K Y G P D G A V A R A L S P M P I
pt039991_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - V G A G L T G G T T E K K K R G R P R K Y G P D G A V A R A L S P M P I
 
AT4G12080.1     S - S A P A P S H L P P P S S H V I D F S A S E K R S K V K P T N S F N R T K Y H H Q - V E N L G E W A P C S V G G N F
pt016418_POPTR_    S A S A P H T G G - - - - - - - - - D Y S A G - K P G K V W P - G S Y E K K K Y K K M G M E N L G E W A A N S V G T N F
pt039991_POPTR_    S A S A P S P G G - - - - - - - - - D Y S A G - K P G K V W P - G S Y E K K K Y K K L G M E N L G E W A A N S V G T N F
 
AT4G12080.1     T P H I I T V N T G E D V T M K I I S F S Q Q G P R S I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I
pt016418_POPTR_    T P H V I T V N A G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I
pt039991_POPTR_    T P H V I T V N A G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I
 
AT4G12080.1     L S L S G S F M P N D S G G T R S R T G G M S V S L A S P D G R V V G G G L A G L L V A A S P V Q V V V G S F L A G T D
pt016418_POPTR_    L S L S G S F M P T E I Q G T R S R S G G M S V S L A S P D G R V V G G S V A G L L V A A S P V Q V V V G S F L P G - N
pt039991_POPTR_    L S L S G S F M P T E S Q G T R S R S G G M S V S L A S P D G R V V G G S V A G L L V A A S P V Q V V V G S F L A G - N
 
AT4G12080.1     H Q D Q K P K K N K H D F M L S S - - P T A A I P I S S A A D H R T I H - - - - - S V S S L P V N N N T W Q T S L A - S
pt016418_POPTR_    H Q E Q K P K K P K I D S I P A T F A P A P A I P A S I A E R E E S A G T P Q G - Q Q N S S P F Q R E N W A T M H S M Q
pt039991_POPTR_    H Q D Q K P K K P K I D S I P A T F A P A P V I P V S I A E R E E S V G T P H G Q Q Q N S S S F Q R E N W A T M H S M Q
 
AT4G12080.1     D P R N K H T D I N V N V T - -
pt016418_POPTR_    D V R N S G T D I N I S L P E G
pt039991_POPTR_    D V R N S V T D I N I S L P E G
 
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