fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011216 not found in 332aa AT4G12080.1 1st_1st 0.470588235 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12080.1     MVLNMESTGEAVRSTTGNDG--GITVVRSDAPSDFHVAQRSESS-NQSPTSVTPPPPQPS
pt011216_POPTR_ ----METT---VSSKSSNSGGAGVTVVASDAPSNYQIAPRSDSNPNSTPGSAPPAPPQ--
                    **:*   * *.:.*.*  *:*** *****::::* **:*. *.:* *..*.***  

AT4G12080.1     SHHTAPPPLQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGPDGTV-VALSPKPISS-A
pt011216_POPTR_ ----APPP------HPSPAAATMP------LKKKRGRPRKYGPDGSVTMALSPKPISSAA
                    ****       .:.::*:*       :**************:* :********* *

AT4G12080.1     PAPSHLPPPSSHVIDFSASEKRSKVKPTN----SFNRTKYHHQVENLGEWAPCSVGGNFT
pt011216_POPTR_ PAPS---PP---VIDFSVV-KQKKIKPVSKAKISVSWLLMLWQFDLLGEWVACSVGANFT
                ****   **   *****.  *:.*:**..    *..      *.: ****..****.***

AT4G12080.1     PHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEIL
pt011216_POPTR_ PHIITVNAGEDVTMKIISFSQQGPRAICVLSANGVISSVTLRQPDSSGGTLTYEGRFEIL
                *******:*****************:**********************************

AT4G12080.1     SLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQ-VVVGSFLAGTD
pt011216_POPTR_ SLSGSFMPTETGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVVGSFLAGNQ
                ********.::******:******************:*********** *********.:

AT4G12080.1     HQDQKPKKNKHDFMLSS--PTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKH
pt011216_POPTR_ HE-QKPKKQKHD-SLSGVMPTAAIPI-SIADPKS--NFSSPSFRGDSW-SPLPPESRNKP
                *: *****:***  **.  ******* * ** ::  ..** ....::* :.*..:.*** 

AT4G12080.1     TDINVNVT--
pt011216_POPTR_ ADINLTLPAG
                :***:.:.
BoxShade v3.31 C (beta, 970507) Output
AT4G12080.1     M V L N M E S T G E A V R S T T G N D G - - G I T V V R S D A P S D F H V A Q R S E S S - N Q S P T S V T P P P P Q P S
pt011216_POPTR_    - - - - M E T T - - - V S S K S S N S G G A G V T V V A S D A P S N Y Q I A P R S D S N P N S T P G S A P P A P P Q - -
 
AT4G12080.1     S H H T A P P P L Q I S T V T T T T T T A A M E G I S G G L M K K K R G R P R K Y G P D G T V - V A L S P K P I S S - A
pt011216_POPTR_    - - - - A P P P - - - - - - H P S P A A A T M P - - - - - - L K K K R G R P R K Y G P D G S V T M A L S P K P I S S A A
 
AT4G12080.1     P A P S H L P P P S S H V I D F S A S E K R S K V K P T N - - - - S F N R T K Y H H Q V E N L G E W A P C S V G G N F T
pt011216_POPTR_    P A P S - - - P P - - - V I D F S V V - K Q K K I K P V S K A K I S V S W L L M L W Q F D L L G E W V A C S V G A N F T
 
AT4G12080.1     P H I I T V N T G E D V T M K I I S F S Q Q G P R S I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L
pt011216_POPTR_    P H I I T V N A G E D V T M K I I S F S Q Q G P R A I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L
 
AT4G12080.1     S L S G S F M P N D S G G T R S R T G G M S V S L A S P D G R V V G G G L A G L L V A A S P V Q - V V V G S F L A G T D
pt011216_POPTR_    S L S G S F M P T E T G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V V G S F L A G N Q
 
AT4G12080.1     H Q D Q K P K K N K H D F M L S S - - P T A A I P I S S A A D H R T I H S V S S L P V N N N T W Q T S L A S D P R N K H
pt011216_POPTR_    H E - Q K P K K Q K H D - S L S G V M P T A A I P I - S I A D P K S - - N F S S P S F R G D S W - S P L P P E S R N K P
 
AT4G12080.1     T D I N V N V T - -
pt011216_POPTR_    A D I N L T L P A G
 
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