fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011216 not found in 332aa AT4G12080.1 1st_1st 0.470588235 Ia
Pt016418 not found in 324aa AT4G12080.1 not_1st 0.460084033 II
Pt039991 not found in 325aa AT4G12080.1 not_1st 0.460084033 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12080.1     MVLNMESTGEAVRSTTGNDGGITVVRSDAPSDFHVAQRSES-SNQSPTSVTPPPPQPSSH
pt039991_POPTR_ ----ME-------GREGLSAGVTVIGAEAPSNYHVAPRTEN-----PGQFVVSPPA----
pt016418_POPTR_ ----ME-------GREGLSSGVTVIGAEAPSTYHMAPRTEN-----PGQIVVSPPA----
pt011216_POPTR_ ----METTVSS-KSSNSGGAGVTVVASDAPSNYQIAPRSDSNPNSTPGSAPPAPP-----
                    **       .  . ..*:**: ::*** :::* *::.     * .   .**     

AT4G12080.1     HTAPPPLQISTVTTTTTTAAMEGISGGLMKKKRGRPRKYGPDGTVV-ALSPKPISSAPAP
pt039991_POPTR_ -VEVPPVGAGLTGGTTE------------KKKRGRPRKYGPDGAVARALSPMPISASA--
pt016418_POPTR_ -VEVPPVGAGLIGGTAE------------KKKRGRPRKYGPDGAVARALSPMPISASA--
pt011216_POPTR_ --QAPPPHPSPAAATMP-----------LKKKRGRPRKYGPDGSVTMALSPKPISSAA--
                    **   .    *              **************:*. **** ***::.  

AT4G12080.1     SHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHH-----QVENLGEWAPCSVGGNFTPH
pt039991_POPTR_ ---PSPGG---DYSAG-KPGKVWPG-SYEKKKYKKLGM----ENLGEWAANSVGTNFTPH
pt016418_POPTR_ ---PHTGG---DYSAG-KPGKVWPG-SYEKKKYKKMGM----ENLGEWAANSVGTNFTPH
pt011216_POPTR_ ---PAPSPPVIDFSVV-KQKKIKPV-SKAKISVSWLLMLWQFDLLGEWVACSVGANFTPH
                   * ..    *:*.  *  *: *  *  : .          : ****.. *** *****

AT4G12080.1     IITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSL
pt039991_POPTR_ VITVNAGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSL
pt016418_POPTR_ VITVNAGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSL
pt011216_POPTR_ IITVNAGEDVTMKIISFSQQGPRAICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSL
                :****:*******:*********:**:********.************************

AT4G12080.1     SGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQ-VVVGSFLAGTDHQ
pt039991_POPTR_ SGSFMPTESQGTRSRSGGMSVSLASPDGRVVGGSVAGLLVAASPVQ-VVVGSFLAG-NHQ
pt016418_POPTR_ SGSFMPTEIQGTRSRSGGMSVSLASPDGRVVGGSVAGLLVAASPVQ-VVVGSFLPG-NHQ
pt011216_POPTR_ SGSFMPTETGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVVGSFLAG-NQH
                ******.:  *****:*****************.:*********** *******.* :::

AT4G12080.1     DQKPKKNKHDFMLSS--PTAAIPISSAADHRTIHSV-----SSLPVNNNTWQTSLA-SDP
pt039991_POPTR_ DQKPKKPKIDSIPATFAPAPVIPVSIAEREESVGTPHGQQQNSSSFQRENWATMHSMQDV
pt016418_POPTR_ EQKPKKPKIDSIPATFAPAPAIPASIAEREESAGTPQG-QQNSSPFQRENWATMHSMQDV
pt011216_POPTR_ EQKPKKQKHDSLSGVM-PTAAIPISIADPKSNFSSP--------SFRGDSWSPLPP--ES
                :***** * * : .   *:..** * *  . .  :         ... :.* .  .  : 

AT4G12080.1     RNKHTDINVNVT--
pt039991_POPTR_ RNSVTDINISLPEG
pt016418_POPTR_ RNSGTDINISLPEG
pt011216_POPTR_ RNKPADINLTLPAG
                **. :***:.:.
BoxShade v3.31 C (beta, 970507) Output
AT4G12080.1     M V L N M E S T G E A V R S T T G N D G G I T V V R S D A P S D F H V A Q R S E S - S N Q S P T S V T P P P P Q P S S H
pt039991_POPTR_    - - - - M E - - - - - - - G R E G L S A G V T V I G A E A P S N Y H V A P R T E N - - - - - P G Q F V V S P P A - - - -
pt016418_POPTR_    - - - - M E - - - - - - - G R E G L S S G V T V I G A E A P S T Y H M A P R T E N - - - - - P G Q I V V S P P A - - - -
pt011216_POPTR_    - - - - M E T T V S S - K S S N S G G A G V T V V A S D A P S N Y Q I A P R S D S N P N S T P G S A P P A P P - - - - -
 
AT4G12080.1     H T A P P P L Q I S T V T T T T T T A A M E G I S G G L M K K K R G R P R K Y G P D G T V V - A L S P K P I S S A P A P
pt039991_POPTR_    - V E V P P V G A G L T G G T T E - - - - - - - - - - - - K K K R G R P R K Y G P D G A V A R A L S P M P I S A S A - -
pt016418_POPTR_    - V E V P P V G A G L I G G T A E - - - - - - - - - - - - K K K R G R P R K Y G P D G A V A R A L S P M P I S A S A - -
pt011216_POPTR_    - - Q A P P P H P S P A A A T M P - - - - - - - - - - - L K K K R G R P R K Y G P D G S V T M A L S P K P I S S A A - -
 
AT4G12080.1     S H L P P P S S H V I D F S A S E K R S K V K P T N S F N R T K Y H H - - - - - Q V E N L G E W A P C S V G G N F T P H
pt039991_POPTR_    - - - P S P G G - - - D Y S A G - K P G K V W P G - S Y E K K K Y K K L G M - - - - E N L G E W A A N S V G T N F T P H
pt016418_POPTR_    - - - P H T G G - - - D Y S A G - K P G K V W P G - S Y E K K K Y K K M G M - - - - E N L G E W A A N S V G T N F T P H
pt011216_POPTR_    - - - P A P S P P V I D F S V V - K Q K K I K P V - S K A K I S V S W L L M L W Q F D L L G E W V A C S V G A N F T P H
 
AT4G12080.1     I I T V N T G E D V T M K I I S F S Q Q G P R S I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L
pt039991_POPTR_    V I T V N A G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I L S L
pt016418_POPTR_    V I T V N A G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I L S L
pt011216_POPTR_    I I T V N A G E D V T M K I I S F S Q Q G P R A I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L
 
AT4G12080.1     S G S F M P N D S G G T R S R T G G M S V S L A S P D G R V V G G G L A G L L V A A S P V Q - V V V G S F L A G T D H Q
pt039991_POPTR_    S G S F M P T E S Q G T R S R S G G M S V S L A S P D G R V V G G S V A G L L V A A S P V Q - V V V G S F L A G - N H Q
pt016418_POPTR_    S G S F M P T E I Q G T R S R S G G M S V S L A S P D G R V V G G S V A G L L V A A S P V Q - V V V G S F L P G - N H Q
pt011216_POPTR_    S G S F M P T E T G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V V G S F L A G - N Q H
 
AT4G12080.1     D Q K P K K N K H D F M L S S - - P T A A I P I S S A A D H R T I H S V - - - - - S S L P V N N N T W Q T S L A - S D P
pt039991_POPTR_    D Q K P K K P K I D S I P A T F A P A P V I P V S I A E R E E S V G T P H G Q Q Q N S S S F Q R E N W A T M H S M Q D V
pt016418_POPTR_    E Q K P K K P K I D S I P A T F A P A P A I P A S I A E R E E S A G T P Q G - Q Q N S S P F Q R E N W A T M H S M Q D V
pt011216_POPTR_    E Q K P K K Q K H D S L S G V M - P T A A I P I S I A D P K S N F S S P - - - - - - - - S F R G D S W S P L P P - - E S
 
AT4G12080.1     R N K H T D I N V N V T - -
pt039991_POPTR_    R N S V T D I N I S L P E G
pt016418_POPTR_    R N S G T D I N I S L P E G
pt011216_POPTR_    R N K P A D I N L T L P A G
 
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