fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047003 not found in 331aa AT4G12080.1 not_1st 0.542016806 II
Gm011353 not found in 327aa AT4G12080.1 not_1st 0.539915966 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12080.1     MVLNMESTGEAVRSTTGNDGGITVVRSDAPSDFHVAQRSESSNQSPTSVTPPPPQPSSHH
gm047003_Glyma1 ----METSG-------GVSGGVTLVGSDAPSDYHVAPRTDNPAPASGSTTQIPATAGSVP
gm011353_Glyma0 ----MEASG-------GVSSGVTVVGSDAPSDYHVAPRTDNPAPASGSTTQIPATAGSAL
                    **::*       * ..*:*:* ******:*** *::..  :. *.*  *. ..*  

AT4G12080.1     TAPPPLQISTVTTTTTTAAMEGISGGL-MKKKRGRPRKYGPDGTV-VALSPKPISSAPAP
gm047003_Glyma1 PSPHPPH---------TAAMEAYPAKMPAKKKRGRPRKYAPDGSVTMALSPKPISSS-AP
gm011353_Glyma0 SPSHPPH---------TAAMEAYPATMPAKKKRGRPRKYAPDGSVTMALSPKPISSS-AP
                ... * :         *****. .. :  **********.***:* :*********: **

AT4G12080.1     SHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVN
gm047003_Glyma1 --LPP----VIDFS-SEKRGKIKPTSSVSKAKF--ELENLGEWVACSVGANFTPHIITVN
gm011353_Glyma0 --LPP----VIDFS-SEKRGKIKPASSVSKAKF--ELENLGEWVACSVGANFTPHIITVN
                  ***    ***** ****.*:**:.*..::*:  ::******..****.**********

AT4G12080.1     TGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFM
gm047003_Glyma1 SGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFM
gm011353_Glyma0 SGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFM
                :*******:*********:**:**************************************

AT4G12080.1     PNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKK
gm047003_Glyma1 PSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHE-QKPRK
gm011353_Glyma0 PNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHE-QKPRK
                *.:*******:******************:********************.:*: ***:*

AT4G12080.1     NKHDFMLS-SPTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKHTDINVNVT-
gm047003_Glyma1 QRHEVITSVIPAAVVPIST-LDPVPILSAAS-SIRNDNW-SAMPAEAKNKPADINVSLPA
gm011353_Glyma0 QKHEVISSVTPAAVVPIST-LDPVSILSAAS-SIRNDNW-SAMPAEAKDKPADINVSLPA
                ::*:.: *  *:*.:***:  *  .* *.:* .:.*:.* :::.::.::* :****.:. 

AT4G12080.1     -----
gm047003_Glyma1 GFVFM
gm011353_Glyma0 G----
BoxShade v3.31 C (beta, 970507) Output
AT4G12080.1     M V L N M E S T G E A V R S T T G N D G G I T V V R S D A P S D F H V A Q R S E S S N Q S P T S V T P P P P Q P S S H H
gm047003_Glyma1    - - - - M E T S G - - - - - - - G V S G G V T L V G S D A P S D Y H V A P R T D N P A P A S G S T T Q I P A T A G S V P
gm011353_Glyma0    - - - - M E A S G - - - - - - - G V S S G V T V V G S D A P S D Y H V A P R T D N P A P A S G S T T Q I P A T A G S A L
 
AT4G12080.1     T A P P P L Q I S T V T T T T T T A A M E G I S G G L - M K K K R G R P R K Y G P D G T V - V A L S P K P I S S A P A P
gm047003_Glyma1    P S P H P P H - - - - - - - - - T A A M E A Y P A K M P A K K K R G R P R K Y A P D G S V T M A L S P K P I S S S - A P
gm011353_Glyma0    S P S H P P H - - - - - - - - - T A A M E A Y P A T M P A K K K R G R P R K Y A P D G S V T M A L S P K P I S S S - A P
 
AT4G12080.1     S H L P P P S S H V I D F S A S E K R S K V K P T N S F N R T K Y H H Q V E N L G E W A P C S V G G N F T P H I I T V N
gm047003_Glyma1    - - L P P - - - - V I D F S - S E K R G K I K P T S S V S K A K F - - E L E N L G E W V A C S V G A N F T P H I I T V N
gm011353_Glyma0    - - L P P - - - - V I D F S - S E K R G K I K P A S S V S K A K F - - E L E N L G E W V A C S V G A N F T P H I I T V N
 
AT4G12080.1     T G E D V T M K I I S F S Q Q G P R S I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M
gm047003_Glyma1    S G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M
gm011353_Glyma0    S G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M
 
AT4G12080.1     P N D S G G T R S R T G G M S V S L A S P D G R V V G G G L A G L L V A A S P V Q V V V G S F L A G T D H Q D Q K P K K
gm047003_Glyma1    P S E S G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V G S F L A G N Q H E - Q K P R K
gm011353_Glyma0    P N E S G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V G S F L A G N Q H E - Q K P R K
 
AT4G12080.1     N K H D F M L S - S P T A A I P I S S A A D H R T I H S V S S L P V N N N T W Q T S L A S D P R N K H T D I N V N V T -
gm047003_Glyma1    Q R H E V I T S V I P A A V V P I S T - L D P V P I L S A A S - S I R N D N W - S A M P A E A K N K P A D I N V S L P A
gm011353_Glyma0    Q K H E V I S S V T P A A V V P I S T - L D P V S I L S A A S - S I R N D N W - S A M P A E A K D K P A D I N V S L P A
 
AT4G12080.1     - - - - -
gm047003_Glyma1    G F V F M
gm011353_Glyma0    G - - - -
 
0