fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047004 not found in 327aa AT4G12080.1 1st_1st 0.542016806 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12080.1     MVLNMESTGEAVRSTTGNDGGITVVRSDAPSDFHVAQRSE-------SSNQSPTSVTPPP
gm047004_Glyma1 ----METSG-------GVSGGVTLVGSDAPSDYHVAPRTDNPAPASGSTTQIPATAGSVP
                    **::*       * .**:*:* ******:*** *::       *:.* *::. . *

AT4G12080.1     PQPSSHHTAPPPLQISTVTTTTTTAAMEGISGGL-MKKKRGRPRKYGPDGTV-VALSPKP
gm047004_Glyma1 PSPHPPH----------------TAAMEAYPAKMPAKKKRGRPRKYAPDGSVTMALSPKP
                *.* . *                *****. .. :  **********.***:* :******

AT4G12080.1     ISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFT
gm047004_Glyma1 ISSS-AP--LPP----VIDFS-SEKRGKIKPTSSVSKAKF--ELENLGEWVACSVGANFT
                ***: **  ***    ***** ****.*:***.*..::*:  ::******..****.***

AT4G12080.1     PHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEIL
gm047004_Glyma1 PHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEIL
                *******:*******:*********:**:*******************************

AT4G12080.1     SLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDH
gm047004_Glyma1 SLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQH
                ********.:*******:******************:********************.:*

AT4G12080.1     QDQKPKKNKHDFMLSS-PTAAIPISSAADHRTIHSVSSLPVNNNTWQTSLASDPRNKHTD
gm047004_Glyma1 E-QKPRKQRHEVITSVIPAAVVPISTLDPVPILSAASS--IRNDNW-SAMPAEAKNKPAD
                : ***:*::*:.: *  *:*.:***:      : :.**  :.*:.* :::.::.:** :*

AT4G12080.1     INVNVT--
gm047004_Glyma1 INVSLPAG
                ***.:.
BoxShade v3.31 C (beta, 970507) Output
AT4G12080.1     M V L N M E S T G E A V R S T T G N D G G I T V V R S D A P S D F H V A Q R S E - - - - - - - S S N Q S P T S V T P P P
gm047004_Glyma1    - - - - M E T S G - - - - - - - G V S G G V T L V G S D A P S D Y H V A P R T D N P A P A S G S T T Q I P A T A G S V P
 
AT4G12080.1     P Q P S S H H T A P P P L Q I S T V T T T T T T A A M E G I S G G L - M K K K R G R P R K Y G P D G T V - V A L S P K P
gm047004_Glyma1    P S P H P P H - - - - - - - - - - - - - - - - T A A M E A Y P A K M P A K K K R G R P R K Y A P D G S V T M A L S P K P
 
AT4G12080.1     I S S A P A P S H L P P P S S H V I D F S A S E K R S K V K P T N S F N R T K Y H H Q V E N L G E W A P C S V G G N F T
gm047004_Glyma1    I S S S - A P - - L P P - - - - V I D F S - S E K R G K I K P T S S V S K A K F - - E L E N L G E W V A C S V G A N F T
 
AT4G12080.1     P H I I T V N T G E D V T M K I I S F S Q Q G P R S I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L
gm047004_Glyma1    P H I I T V N S G E D V T M K V I S F S Q Q G P R A I C I L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L
 
AT4G12080.1     S L S G S F M P N D S G G T R S R T G G M S V S L A S P D G R V V G G G L A G L L V A A S P V Q V V V G S F L A G T D H
gm047004_Glyma1    S L S G S F M P S E S G G T R S R S G G M S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V G S F L A G N Q H
 
AT4G12080.1     Q D Q K P K K N K H D F M L S S - P T A A I P I S S A A D H R T I H S V S S L P V N N N T W Q T S L A S D P R N K H T D
gm047004_Glyma1    E - Q K P R K Q R H E V I T S V I P A A V V P I S T L D P V P I L S A A S S - - I R N D N W - S A M P A E A K N K P A D
 
AT4G12080.1     I N V N V T - -
gm047004_Glyma1    I N V S L P A G
 
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