fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048242 not found in 298aa AT4G12240.1 not_1st 0.477678571 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12240.1     MFSRFVLKSWRPKTQTTSLNSIKGFSFSSSSINPKPKIRVGVWWDLDNKPPASFPPYDAA
gm048242_Glyma1 ------------------------------------------------------------
                                                                            

AT4G12240.1     VKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDRKLLNKLENKGLVKPPEPYFCG
gm048242_Glyma1 ---------------MAAYANSHTFSHVPQGVREIRKEKELLYRLENKGVIKPNQPYRCK
                               * **** *:**:**  *** **:::** :*****::** :** * 

AT4G12240.1     VCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNV
gm048242_Glyma1 VCGRKFHTNDKLVNHFKQLHEREHAKRMNQIESSRGSRRVKLVAKYSMKMEKYKKAASDI
                **.*:*:**:**:*****:** *: ***.*****:* ***:********:****:** ::

AT4G12240.1     LTPKEGYGLADELKRAGFWVKMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFA
gm048242_Glyma1 LTPKVGYGLADELRRAGFWVQTVSDKPQAADQALQSHIVDIMDHRRVECVVLVSDDSDFV
                **** ********:******: *****:***:**:.*:*::**:*.*************.

AT4G12240.1     GILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLK
gm048242_Glyma1 DVINEAKMRCLKTVVIGDIDDGFLKRTADTAFSWEEILMGKAKKQAVSVVKNWKDRDILK
                .:: *** ***:****** ::* ***.**.*:**:*: ******:. .** :*****:**

AT4G12240.1     KLEWTYDPALEKERGGSCGVWDYEF-----------DYDDEIENGTEVEPVEIGDGVDWW
gm048242_Glyma1 RLEWTYNPDEDKNN----FIWMMPLLKHLKMIILIEDTCDEVDDAYK------DDRGSWW
                :*****:*  :*:.     :*   :           *  **:::. :      .*  .**

AT4G12240.1     KIDTEDGVGSSRTCR--------
gm048242_Glyma1 ELDSDDDATNGQSGKLSDLYVNR
                ::*::*.. ..:: :
BoxShade v3.31 C (beta, 970507) Output
AT4G12240.1     M F S R F V L K S W R P K T Q T T S L N S I K G F S F S S S S I N P K P K I R V G V W W D L D N K P P A S F P P Y D A A
gm048242_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G12240.1     V K L R T A A S S F G T V K L M M A Y A N R H A F S Y V P L E V R E Q R K D R K L L N K L E N K G L V K P P E P Y F C G
gm048242_Glyma1    - - - - - - - - - - - - - - - M A A Y A N S H T F S H V P Q G V R E I R K E K E L L Y R L E N K G V I K P N Q P Y R C K
 
AT4G12240.1     V C D R R F Y T N E K L I N H F K Q I H E T E N Q K R M R Q I E S S K G H R R V R L V A K Y S M K I E K Y K R A A R N V
gm048242_Glyma1    V C G R K F H T N D K L V N H F K Q L H E R E H A K R M N Q I E S S R G S R R V K L V A K Y S M K M E K Y K K A A S D I
 
AT4G12240.1     L T P K E G Y G L A D E L K R A G F W V K M V S D K P D A A D K A L K E H L V E V M D K R E V E C V V L V S D D S D F A
gm048242_Glyma1    L T P K V G Y G L A D E L R R A G F W V Q T V S D K P Q A A D Q A L Q S H I V D I M D H R R V E C V V L V S D D S D F V
 
AT4G12240.1     G I L W E A K E R C L R T V V I G D S N E G A L K R V A D V A Y S W K E V T M G K A K K E V E K V V G K W K D R D V L K
gm048242_Glyma1    D V I N E A K M R C L K T V V I G D I D D G F L K R T A D T A F S W E E I L M G K A K K Q A V S V V K N W K D R D I L K
 
AT4G12240.1     K L E W T Y D P A L E K E R G G S C G V W D Y E F - - - - - - - - - - - D Y D D E I E N G T E V E P V E I G D G V D W W
gm048242_Glyma1    R L E W T Y N P D E D K N N - - - - F I W M M P L L K H L K M I I L I E D T C D E V D D A Y K - - - - - - D D R G S W W
 
AT4G12240.1     K I D T E D G V G S S R T C R - - - - - - - -
gm048242_Glyma1    E L D S D D D A T N G Q S G K L S D L Y V N R
 
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