fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031989 not found in 286aa AT4G12240.1 1st_1st 0.502976190 Ia
Pt010920 not found in 413aa AT4G12240.1 1st_1st 0.587797619 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12240.1     ----------------------MFSRF-----VLKSWRPKTQTTSLNSIKGFSFS-----
pt010920_POPTR_ MKKFQFLRLSVALYQQTPLHMLMFLKFRNFSHSIKSTRLKNQNPCFELFRFCHFDSKLGL
gm031989_Glyma1 ------------------------------------------------------------
                                                                            

AT4G12240.1     -SSSINP-----KPKIRVGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANR
pt010920_POPTR_ GSSSLTPTLSPQKPQNNVAIFWDLDNKPPKTVSPFEAAIKLKTAVCSFGFVKYMVAYANR
gm031989_Glyma1 -----------------------------------------------------MVAYANS
                                                                     *:**** 

AT4G12240.1     HAFSYVPLEVREQRKDRKLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHET
pt010920_POPTR_ HAFSYVPQVVREERKQRKSLNQLENKGVIKPVESYLCRVCGRNFYNNEKFINHFKQIHER
gm031989_Glyma1 HTFSHVPQGVRESRKEKELLYRLENKGVIKPNQPYRCKVCGRKFYTNDKLVNHFKQLHES
                *:**:**  ***.**::: * :*****::** :.* * **.*.**.*:*::*****:** 

AT4G12240.1     ENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWVKM
pt010920_POPTR_ EQQKRLNQIESARGKRRVMLVGKYAMKMQKYKNAARDILTPKVGYGLADELKRAGFWVRT
gm031989_Glyma1 EHTKRMNQIESARGSRRVKLVAKYSMKMEKYKKAASDILTPKVGYGLADELKRAGFWVRT
                *: **:.****::* *** **.**:**::***.** ::**** ***************: 

AT4G12240.1     VSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEG
pt010920_POPTR_ VLDKPQAADVALKDHMVDMMDKRRAECFVLVSDDSDFVHVLKEAKSRCLKTVVVGDVNDG
gm031989_Glyma1 VSDKPQAADQALQSHIVDIMDHRRVECVVLVSDDSDFVDVINEAKMRCLKTVVIGDIDEG
                * ***:*** **:.*:*::**:*..**.*********. :: *** ***:***:** ::*

AT4G12240.1     ALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLKKLEWTYDPALEK----------
pt010920_POPTR_ ALKRVADAGFSWQEILMGKAKKDAETVVGRWKDRDVLKRLEWIYDPEVEK---NLHGMVY
gm031989_Glyma1 FLKRTADTAFSWEEILMGKAKKQAVSVVKNWKDRDILKKLEWTYNPDEDKSNFNLDDTVT
                 ***.**..:**:*: ******:. .** .*****:**:*** *:*  :*          

AT4G12240.1     -----ERGGSCGVWDYEFDYD-DEIENG--TEVEPVEIGDGVDWWKIDTEDGVGSSRTCR
pt010920_POPTR_ EFDNHESKDECDGNDSE-DGDIDNILDG--DDVGCLQKEDARGWWELDSNPEVTSSQSC-
gm031989_Glyma1 E-------------ASE-D---DNIEDTTCDEVDDAYKDDRGSWWELDSDDDATNR----
                                * *   *:* :    :*      *  .**::*::  . .
BoxShade v3.31 C (beta, 970507) Output
AT4G12240.1     - - - - - - - - - - - - - - - - - - - - - - M F S R F - - - - - V L K S W R P K T Q T T S L N S I K G F S F S - - - - -
pt010920_POPTR_    M K K F Q F L R L S V A L Y Q Q T P L H M L M F L K F R N F S H S I K S T R L K N Q N P C F E L F R F C H F D S K L G L
gm031989_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G12240.1     - S S S I N P - - - - - K P K I R V G V W W D L D N K P P A S F P P Y D A A V K L R T A A S S F G T V K L M M A Y A N R
pt010920_POPTR_    G S S S L T P T L S P Q K P Q N N V A I F W D L D N K P P K T V S P F E A A I K L K T A V C S F G F V K Y M V A Y A N R
gm031989_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V A Y A N S
 
AT4G12240.1     H A F S Y V P L E V R E Q R K D R K L L N K L E N K G L V K P P E P Y F C G V C D R R F Y T N E K L I N H F K Q I H E T
pt010920_POPTR_    H A F S Y V P Q V V R E E R K Q R K S L N Q L E N K G V I K P V E S Y L C R V C G R N F Y N N E K F I N H F K Q I H E R
gm031989_Glyma1    H T F S H V P Q G V R E S R K E K E L L Y R L E N K G V I K P N Q P Y R C K V C G R K F Y T N D K L V N H F K Q L H E S
 
AT4G12240.1     E N Q K R M R Q I E S S K G H R R V R L V A K Y S M K I E K Y K R A A R N V L T P K E G Y G L A D E L K R A G F W V K M
pt010920_POPTR_    E Q Q K R L N Q I E S A R G K R R V M L V G K Y A M K M Q K Y K N A A R D I L T P K V G Y G L A D E L K R A G F W V R T
gm031989_Glyma1    E H T K R M N Q I E S A R G S R R V K L V A K Y S M K M E K Y K K A A S D I L T P K V G Y G L A D E L K R A G F W V R T
 
AT4G12240.1     V S D K P D A A D K A L K E H L V E V M D K R E V E C V V L V S D D S D F A G I L W E A K E R C L R T V V I G D S N E G
pt010920_POPTR_    V L D K P Q A A D V A L K D H M V D M M D K R R A E C F V L V S D D S D F V H V L K E A K S R C L K T V V V G D V N D G
gm031989_Glyma1    V S D K P Q A A D Q A L Q S H I V D I M D H R R V E C V V L V S D D S D F V D V I N E A K M R C L K T V V I G D I D E G
 
AT4G12240.1     A L K R V A D V A Y S W K E V T M G K A K K E V E K V V G K W K D R D V L K K L E W T Y D P A L E K - - - - - - - - - -
pt010920_POPTR_    A L K R V A D A G F S W Q E I L M G K A K K D A E T V V G R W K D R D V L K R L E W I Y D P E V E K - - - N L H G M V Y
gm031989_Glyma1    F L K R T A D T A F S W E E I L M G K A K K Q A V S V V K N W K D R D I L K K L E W T Y N P D E D K S N F N L D D T V T
 
AT4G12240.1     - - - - - E R G G S C G V W D Y E F D Y D - D E I E N G - - T E V E P V E I G D G V D W W K I D T E D G V G S S R T C R
pt010920_POPTR_    E F D N H E S K D E C D G N D S E - D G D I D N I L D G - - D D V G C L Q K E D A R G W W E L D S N P E V T S S Q S C -
gm031989_Glyma1    E - - - - - - - - - - - - - A S E - D - - - D N I E D T T C D E V D D A Y K D D R G S W W E L D S D D D A T N R - - - -
 
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