fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010920 not found in 413aa AT4G12240.1 1st_1st 0.587797619 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12240.1     ----------------------MFSRF-----VLKSWRPKTQTTSLNSIKGFSFS-----
pt010920_POPTR_ MKKFQFLRLSVALYQQTPLHMLMFLKFRNFSHSIKSTRLKNQNPCFELFRFCHFDSKLGL
                                      ** :*      :** * *.*...:: ::   *.     

AT4G12240.1     -SSSINP-----KPKIRVGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANR
pt010920_POPTR_ GSSSLTPTLSPQKPQNNVAIFWDLDNKPPKTVSPFEAAIKLKTAVCSFGFVKYMVAYANR
                 ***:.*     **: .*.::******** :..*::**:**:**..*** ** *:*****

AT4G12240.1     HAFSYVPLEVREQRKDRKLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHET
pt010920_POPTR_ HAFSYVPQVVREERKQRKSLNQLENKGVIKPVESYLCRVCGRNFYNNEKFINHFKQIHER
                *******  ***:**:** **:*****::** *.*:* **.*.**.***:********* 

AT4G12240.1     ENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWVKM
pt010920_POPTR_ EQQKRLNQIESARGKRRVMLVGKYAMKMQKYKNAARDILTPKVGYGLADELKRAGFWVRT
                *:***:.****::*:*** **.**:**::***.***::**** ***************: 

AT4G12240.1     VSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEG
pt010920_POPTR_ VLDKPQAADVALKDHMVDMMDKRRAECFVLVSDDSDFVHVLKEAKSRCLKTVVVGDVNDG
                * ***:*** ***:*:*::****..**.*********. :* ***.***:***:** *:*

AT4G12240.1     ALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLKKLEWTYDPALEKERGGSCGVWD
pt010920_POPTR_ ALKRVADAGFSWQEILMGKAKKDAETVVGRWKDRDVLKRLEWIYDPEVEKNLHGMV----
                *******..:**:*: ******:.*.***:********:*** *** :**:  *      

AT4G12240.1     YEFD-------------YDDEIEN---GTEVEPVEIGDGVDWWKIDTEDGVGSSRTCR
pt010920_POPTR_ YEFDNHESKDECDGNDSEDGDIDNILDGDDVGCLQKEDARGWWELDSNPEVTSSQSC-
                ****              *.:*:*   * :*  ::  *. .**::*::  * **::*
BoxShade v3.31 C (beta, 970507) Output
AT4G12240.1     - - - - - - - - - - - - - - - - - - - - - - M F S R F - - - - - V L K S W R P K T Q T T S L N S I K G F S F S - - - - -
pt010920_POPTR_    M K K F Q F L R L S V A L Y Q Q T P L H M L M F L K F R N F S H S I K S T R L K N Q N P C F E L F R F C H F D S K L G L
 
AT4G12240.1     - S S S I N P - - - - - K P K I R V G V W W D L D N K P P A S F P P Y D A A V K L R T A A S S F G T V K L M M A Y A N R
pt010920_POPTR_    G S S S L T P T L S P Q K P Q N N V A I F W D L D N K P P K T V S P F E A A I K L K T A V C S F G F V K Y M V A Y A N R
 
AT4G12240.1     H A F S Y V P L E V R E Q R K D R K L L N K L E N K G L V K P P E P Y F C G V C D R R F Y T N E K L I N H F K Q I H E T
pt010920_POPTR_    H A F S Y V P Q V V R E E R K Q R K S L N Q L E N K G V I K P V E S Y L C R V C G R N F Y N N E K F I N H F K Q I H E R
 
AT4G12240.1     E N Q K R M R Q I E S S K G H R R V R L V A K Y S M K I E K Y K R A A R N V L T P K E G Y G L A D E L K R A G F W V K M
pt010920_POPTR_    E Q Q K R L N Q I E S A R G K R R V M L V G K Y A M K M Q K Y K N A A R D I L T P K V G Y G L A D E L K R A G F W V R T
 
AT4G12240.1     V S D K P D A A D K A L K E H L V E V M D K R E V E C V V L V S D D S D F A G I L W E A K E R C L R T V V I G D S N E G
pt010920_POPTR_    V L D K P Q A A D V A L K D H M V D M M D K R R A E C F V L V S D D S D F V H V L K E A K S R C L K T V V V G D V N D G
 
AT4G12240.1     A L K R V A D V A Y S W K E V T M G K A K K E V E K V V G K W K D R D V L K K L E W T Y D P A L E K E R G G S C G V W D
pt010920_POPTR_    A L K R V A D A G F S W Q E I L M G K A K K D A E T V V G R W K D R D V L K R L E W I Y D P E V E K N L H G M V - - - -
 
AT4G12240.1     Y E F D - - - - - - - - - - - - - Y D D E I E N - - - G T E V E P V E I G D G V D W W K I D T E D G V G S S R T C R
pt010920_POPTR_    Y E F D N H E S K D E C D G N D S E D G D I D N I L D G D D V G C L Q K E D A R G W W E L D S N P E V T S S Q S C -
 
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