fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034586 not found in 285aa AT4G12350.1 1st_1st 0.452173913 Ia
Pt030074 not found in 270aa AT4G12350.1 1st_1st 0.530434782 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12350.1     MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY
Os034586_Os09t0 MGRQPCCDKLGVKRGPWTAEEDKKLMSFILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNY
pt030074_POPTR_ MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNY
                ********** **:***********:.******:*****:****** *************

AT4G12350.1     LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME
Os034586_Os09t0 LRPDLKRGLLTDAEEQLVIDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG
pt030074_POPTR_ LRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKRG
                **********::*********** **********:*********************:*  

AT4G12350.1     IDPSTHQPLNKV------FTDTNLVDKSETSSKAD----NVNDNKIVEIDGTTTNTIDDS
Os034586_Os09t0 IDPVTHEPLDRKQESPATTSQSTVTAESSKSGEATRQQSRQLDDAVVRDMSVSAGGDSPP
pt030074_POPTR_ IDPVTHEPLHK-----------EARPEESSSSHADILPESSNNNVMQENDGIVINSDDNP
                *** **:**.:               :...*..*        :: : .  .   .  . .

AT4G12350.1     IITHQNSSNDDYELLGDIIHNYGDLFNILWTNDEPPLVDDASWSNHNVGIGGTAAVAASD
Os034586_Os09t0 ESSTNTASTAGGSSSSSSSHHQDPLVKWLLEEDLLPTG-DEPWLN------FTASNDVDE
pt030074_POPTR_ RSPTENSSSPEDSILLDSICNDEMLLNSLWM-EEPPLV-DASWNN----------IIPPA
                  . :.:*.   .   .   :   *.: *   :  *   * .* *               

AT4G12350.1     KNNTAAEEDFPERSFEKQNGESWMFLDYCQEFGVEDFGFECYHGFGQSSMKT---GHKD
Os034586_Os09t0 FSSIAATGATPALPWD--VGMTTDWLLDYQDFGMGDSSLVVDASMVNSSNGS---NF--
pt030074_POPTR_ AANTNDDTGYP--SWE----ENYTWLSDCQDFGVHDFGLECFDSMELSALSTLEMEHKH
                  .       *  .::     .  :*   *:**: * .:    .:  *:  :    .
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T N Y
Os034586_Os09t0    M G R Q P C C D K L G V K R G P W T A E E D K K L M S F I L T N G H C C W R A V P K L A G L L R C G K S C R L R W T N Y
pt030074_POPTR_    M G R Q P C C D K L G V K K G P W T A E E D K K L I N F I L T N G Q C C W R A V P K L A G L R R C G K S C R L R W T N Y
 
AT4G12350.1     L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K M E
Os034586_Os09t0    L R P D L K R G L L T D A E E Q L V I D L H A K L G N R W S K I A A K L P G R T D N E I K N H W N T H I K K K L I K M G
pt030074_POPTR_    L R P D L K R G L L T E A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K R G
 
AT4G12350.1     I D P S T H Q P L N K V - - - - - - F T D T N L V D K S E T S S K A D - - - - N V N D N K I V E I D G T T T N T I D D S
Os034586_Os09t0    I D P V T H E P L D R K Q E S P A T T S Q S T V T A E S S K S G E A T R Q Q S R Q L D D A V V R D M S V S A G G D S P P
pt030074_POPTR_    I D P V T H E P L H K - - - - - - - - - - - E A R P E E S S S S H A D I L P E S S N N N V M Q E N D G I V I N S D D N P
 
AT4G12350.1     I I T H Q N S S N D D Y E L L G D I I H N Y G D L F N I L W T N D E P P L V D D A S W S N H N V G I G G T A A V A A S D
Os034586_Os09t0    E S S T N T A S T A G G S S S S S S S H H Q D P L V K W L L E E D L L P T G - D E P W L N - - - - - - F T A S N D V D E
pt030074_POPTR_    R S P T E N S S S P E D S I L L D S I C N D E M L L N S L W M - E E P P L V - D A S W N N - - - - - - - - - - I I P P A
 
AT4G12350.1     K N N T A A E E D F P E R S F E K Q N G E S W M F L D Y C Q E F G V E D F G F E C Y H G F G Q S S M K T - - - G H K D
Os034586_Os09t0    F S S I A A T G A T P A L P W D - - V G M T T D W L L D Y Q D F G M G D S S L V V D A S M V N S S N G S - - - N F - -
pt030074_POPTR_    A A N T N D D T G Y P - - S W E - - - - E N Y T W L S D C Q D F G V H D F G L E C F D S M E L S A L S T L E M E H K H
 
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