fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026582 not found in 274aa AT4G22680.1 not_not 0.467826086 III
Pt024058 not found in 276aa AT4G22680.1 not_not 0.466086956 III
Pt020680 not found in 319aa AT5G16600.1 not_not 0.424347826 III
Pt003387 not found in 321aa AT5G16600.1 not_not 0.420869565 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12350.1     MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY
pt003387_POPTR_ MGRQPCCDKVGLKKGPWTSDEDKKLITFILANGQCCWRAVPKLAGLLRCGKSCRLRWTNY
pt020680_POPTR_ MGRQPCCDKVGLKKGPWTSDEDKKLINFILANGQCCWRAVPKLAGLLRCGKSCRLRWTNY
pt026582_POPTR_ MGRQPCCDKLGVKKGPWTAEEDKKLVSFILSHGQCCWRAVPKLAGLRRCGKSCRLRWTNY
pt024058_POPTR_ MGRQPCCDKLGVKKGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNY
                *********: :******::*****:.***::*:*****:****** *************

AT4G12350.1     LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME
pt003387_POPTR_ LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
pt020680_POPTR_ LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
pt026582_POPTR_ LRPDLKRGLLNDDEEKLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
pt024058_POPTR_ LRPDLKRGLLNEDEEQLVIDLHACLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMG
                **********.: **::****** *********::********************* ** 

AT4G12350.1     IDPSTHQPLNKVFT-----------------------------------DTNLVDKSETS
pt003387_POPTR_ IDPLTHKPLSTIET-PPSPPPQQEVQVQENIQEIEQQAVQQSCSTNIVSELDQNREPETS
pt020680_POPTR_ IDPLTHKPLSAIETPPPPPPPQQEVQVQNSIQELEQQAGRQSSSTNDISELGQNNEPETS
pt026582_POPTR_ IDPVTHGSLSK-----------------------------------------QVSPQEST
pt024058_POPTR_ IDPVTHEPLNK-----------------------------------------LESPQEST
                *** ** .*.                                               *::

AT4G12350.1     SKADNVNDNKIVEIDG---------------------------------TTTNTIDDSII
pt003387_POPTR_ LRSTVTQEEEINNMAASTYGTMEQTDGFCIDEVPLIEPHEILVP--CGLSPSSTPAPTSS
pt020680_POPTR_ LQSARTQDEE-NNI-GSTYDTMERMNGFCTDEVPLIEPHEMLVP--GGPSPSST-STSSL
pt026582_POPTR_ VSCHTNYDQPIINADNQQ-----------------------VLPKICAHASSRTDNSSTT
pt024058_POPTR_ VPCHTNYDQPNFNADGQQ-----------------------VLPQNCGHASSSTTDNSST
                  .    ::   :                                    :.: *   :  

AT4G12350.1     T--HQNSSNDDYELLGDIIHNYG-D---LFNILWTNDEPPLVDDASWSNHNVGIG-----
pt003387_POPTR_ SSSSTSSSSS------SYGSNNILED-------------LLLPDFEWPINNVDIGLWGDY
pt020680_POPTR_ TSASSSSSSS------SYGSNNILDE-------------LLLPDFEWPLNNVDIGLWDDD
pt026582_POPTR_ TTPTENSSVD--ECVGSSEPNN--DNDPTMSFIWSE---AFLDDSSW-------------
pt024058_POPTR_ TTPTENSSVD--ECIGSSEPNSTPDSDPLMSCIWSE---VFLDDSSW-------------
                :    .** .      .   *   :               :: * .*             

AT4G12350.1     -GTAAVAASD---KNNTAAE-EDFPERSFEK----QNGESWMFLDYCQEFGVEDFGFECY
pt003387_POPTR_ LNSWDVLISDAVGDWKQTTM-FDPPLNQCSRMILDQDSWTNGLL----------------
pt020680_POPTR_ LSSWDLLISDVDSGRKQATM-FDPFLNQCPRTVLDQDYWTYGLM----------------
pt026582_POPTR_ --------------NFQATR-EDYSEFGVSNSSSDQDSYSTWFLD-CKDLGDEFFGLSCF
pt024058_POPTR_ --------------NFQASRGGDFSEFGLSKSSS-EDSNSPWVLD-SKDLGDEFFGLSCF
                                 ::   *       .    ::  :  .:                

AT4G12350.1     HGFGQSSMKTGHKD
pt003387_POPTR_ --------------
pt020680_POPTR_ --------------
pt026582_POPTR_ SDMDLSILDMGGKH
pt024058_POPTR_ SDMDLSILDMGGKH
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T N Y
pt003387_POPTR_    M G R Q P C C D K V G L K K G P W T S D E D K K L I T F I L A N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
pt020680_POPTR_    M G R Q P C C D K V G L K K G P W T S D E D K K L I N F I L A N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
pt026582_POPTR_    M G R Q P C C D K L G V K K G P W T A E E D K K L V S F I L S H G Q C C W R A V P K L A G L R R C G K S C R L R W T N Y
pt024058_POPTR_    M G R Q P C C D K L G V K K G P W T A E E D K K L V N F I L T H G Q C C W R A V P K L A G L R R C G K S C R L R W T N Y
 
AT4G12350.1     L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K M E
pt003387_POPTR_    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
pt020680_POPTR_    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
pt026582_POPTR_    L R P D L K R G L L N D D E E K L V I D L H A R L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L I K M G
pt024058_POPTR_    L R P D L K R G L L N E D E E Q L V I D L H A C L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L I K M G
 
AT4G12350.1     I D P S T H Q P L N K V F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D T N L V D K S E T S
pt003387_POPTR_    I D P L T H K P L S T I E T - P P S P P P Q Q E V Q V Q E N I Q E I E Q Q A V Q Q S C S T N I V S E L D Q N R E P E T S
pt020680_POPTR_    I D P L T H K P L S A I E T P P P P P P P Q Q E V Q V Q N S I Q E L E Q Q A G R Q S S S T N D I S E L G Q N N E P E T S
pt026582_POPTR_    I D P V T H G S L S K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q V S P Q E S T
pt024058_POPTR_    I D P V T H E P L N K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L E S P Q E S T
 
AT4G12350.1     S K A D N V N D N K I V E I D G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T T T N T I D D S I I
pt003387_POPTR_    L R S T V T Q E E E I N N M A A S T Y G T M E Q T D G F C I D E V P L I E P H E I L V P - - C G L S P S S T P A P T S S
pt020680_POPTR_    L Q S A R T Q D E E - N N I - G S T Y D T M E R M N G F C T D E V P L I E P H E M L V P - - G G P S P S S T - S T S S L
pt026582_POPTR_    V S C H T N Y D Q P I I N A D N Q Q - - - - - - - - - - - - - - - - - - - - - - - V L P K I C A H A S S R T D N S S T T
pt024058_POPTR_    V P C H T N Y D Q P N F N A D G Q Q - - - - - - - - - - - - - - - - - - - - - - - V L P Q N C G H A S S S T T D N S S T
 
AT4G12350.1     T - - H Q N S S N D D Y E L L G D I I H N Y G - D - - - L F N I L W T N D E P P L V D D A S W S N H N V G I G - - - - -
pt003387_POPTR_    S S S S T S S S S S - - - - - - S Y G S N N I L E D - - - - - - - - - - - - - L L L P D F E W P I N N V D I G L W G D Y
pt020680_POPTR_    T S A S S S S S S S - - - - - - S Y G S N N I L D E - - - - - - - - - - - - - L L L P D F E W P L N N V D I G L W D D D
pt026582_POPTR_    T T P T E N S S V D - - E C V G S S E P N N - - D N D P T M S F I W S E - - - A F L D D S S W - - - - - - - - - - - - -
pt024058_POPTR_    T T P T E N S S V D - - E C I G S S E P N S T P D S D P L M S C I W S E - - - V F L D D S S W - - - - - - - - - - - - -
 
AT4G12350.1     - G T A A V A A S D - - - K N N T A A E - E D F P E R S F E K - - - - Q N G E S W M F L D Y C Q E F G V E D F G F E C Y
pt003387_POPTR_    L N S W D V L I S D A V G D W K Q T T M - F D P P L N Q C S R M I L D Q D S W T N G L L - - - - - - - - - - - - - - - -
pt020680_POPTR_    L S S W D L L I S D V D S G R K Q A T M - F D P F L N Q C P R T V L D Q D Y W T Y G L M - - - - - - - - - - - - - - - -
pt026582_POPTR_    - - - - - - - - - - - - - - N F Q A T R - E D Y S E F G V S N S S S D Q D S Y S T W F L D - C K D L G D E F F G L S C F
pt024058_POPTR_    - - - - - - - - - - - - - - N F Q A S R G G D F S E F G L S K S S S - E D S N S P W V L D - S K D L G D E F F G L S C F
 
AT4G12350.1     H G F G Q S S M K T G H K D
pt003387_POPTR_    - - - - - - - - - - - - - -
pt020680_POPTR_    - - - - - - - - - - - - - -
pt026582_POPTR_    S D M D L S I L D M G G K H
pt024058_POPTR_    S D M D L S I L D M G G K H
 
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