fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034586 not found in 285aa AT4G12350.1 1st_1st 0.452173913 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12350.1     MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY
Os034586_Os09t0 MGRQPCCDKLGVKRGPWTAEEDKKLMSFILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNY
                ********** **:***********:.************:****** *************

AT4G12350.1     LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME
Os034586_Os09t0 LRPDLKRGLLTDAEEQLVIDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG
                **********:************ **********:*********************:** 

AT4G12350.1     IDPSTHQPLNK------VFTDTNLVDKSETSSKA---------DNVNDNKIVEIDG----
Os034586_Os09t0 IDPVTHEPLDRKQESPATTSQSTVTAESSKSGEATRQQSRQLDDAVVRDMSVSAGGDSPP
                *** **:**::      . :::.:. :*..*.:*         * *  :  *. .*    

AT4G12350.1     -TTTNTIDDSIITHQNSSNDDYELLGDIIHNYGDLF------NILWTNDEPPLVDDASWS
Os034586_Os09t0 ESSTNTASTAGGSSSSSSS----------HHQDPLVKWLLEEDLLPTGDEP-------WL
                 ::*** . :  : ..**.          *: . *.      ::* *.***       * 

AT4G12350.1     NHNVGIGGTAAVAASDKNNTAAEEDFPERSFEKQNGESWMFLDYCQEFGVEDFGFECYHG
Os034586_Os09t0 NF------TASNDVDEFSSIAATGATPALPWDVGMTTDWL-LDY-QDFGMGDSSLVVDAS
                *.      **:  ..: .. **    *  .::     .*: *** *:**: * .:    .

AT4G12350.1     FGQSSMKTGHKD
Os034586_Os09t0 MVNSSNGSNF--
                : :**  :..
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T N Y
Os034586_Os09t0    M G R Q P C C D K L G V K R G P W T A E E D K K L M S F I L T N G H C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT4G12350.1     L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K M E
Os034586_Os09t0    L R P D L K R G L L T D A E E Q L V I D L H A K L G N R W S K I A A K L P G R T D N E I K N H W N T H I K K K L I K M G
 
AT4G12350.1     I D P S T H Q P L N K - - - - - - V F T D T N L V D K S E T S S K A - - - - - - - - - D N V N D N K I V E I D G - - - -
Os034586_Os09t0    I D P V T H E P L D R K Q E S P A T T S Q S T V T A E S S K S G E A T R Q Q S R Q L D D A V V R D M S V S A G G D S P P
 
AT4G12350.1     - T T T N T I D D S I I T H Q N S S N D D Y E L L G D I I H N Y G D L F - - - - - - N I L W T N D E P P L V D D A S W S
Os034586_Os09t0    E S S T N T A S T A G G S S S S S S S - - - - - - - - - - H H Q D P L V K W L L E E D L L P T G D E P - - - - - - - W L
 
AT4G12350.1     N H N V G I G G T A A V A A S D K N N T A A E E D F P E R S F E K Q N G E S W M F L D Y C Q E F G V E D F G F E C Y H G
Os034586_Os09t0    N F - - - - - - T A S N D V D E F S S I A A T G A T P A L P W D V G M T T D W L - L D Y - Q D F G M G D S S L V V D A S
 
AT4G12350.1     F G Q S S M K T G H K D
Os034586_Os09t0    M V N S S N G S N F - -
 
0