fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023618 not found in 488aa AT4G22680.1 1st_not 0.453913043 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G12350.1     --MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWT
Sb023618_Sorbi1 FGMGRQPCCDKLGVKRGPWTAEEDRKLINFILTNGHCCWRAVPKLAGLLRCGKSCRLRWT
                  ********** **:********:****************:****** ***********

AT4G12350.1     NYLRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLK
Sb023618_Sorbi1 NYLRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIK
                ************:*****:*****. **********:*********************:*

AT4G12350.1     MEIDPSTHQPLNKVFTD----TNLVDKSETSSKADNVNDNKIVEI-----DG-----TTT
Sb023618_Sorbi1 MGIDPVTHEPLDRKTSSSPATTSQSAKSDEATKQQSPENDDVVVMRDVPADGCSPTESST
                * *** **:**::  :.    *.   **: ::* :. :::.:* :     **     ::*

AT4G12350.1     NTIDDSIITHQNSSNDDYELLGDIIHNYGDLFNILWTNDEPPLVDDASWSNH--NVGIGG
Sb023618_Sorbi1 NTVSTGGSSSSSSGGHDQDPL------------VKWLLEEEPPTGDEPWLNFSGSVDVDE
                **:. .  : ..*...* : *            : *  :* * ..* .* *.  .*.:. 

AT4G12350.1     TAAVAASDKNNTAAEEDFPERSFEKQNGESWMFLDYCQEFGVEDFGFECYHGFGQSSMKT
Sb023618_Sorbi1 FSSIAAG-----------PE--LLPWDGATDWLLDY-QDFGLGDSA-TLVDGYMVNNSSN
                 :::**.           **  :   :* :  :*** *:**: * .    .*:  .. ..

AT4G12350.1     GHKD
Sb023618_Sorbi1 GAKL
                * *
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     - - M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T
Sb023618_Sorbi1    F G M G R Q P C C D K L G V K R G P W T A E E D R K L I N F I L T N G H C C W R A V P K L A G L L R C G K S C R L R W T
 
AT4G12350.1     N Y L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K
Sb023618_Sorbi1    N Y L R P D L K R G L L T D A E E Q V V I D L H G K L G N R W S K I A A K L P G R T D N E I K N H W N T H I K K K L I K
 
AT4G12350.1     M E I D P S T H Q P L N K V F T D - - - - T N L V D K S E T S S K A D N V N D N K I V E I - - - - - D G - - - - - T T T
Sb023618_Sorbi1    M G I D P V T H E P L D R K T S S S P A T T S Q S A K S D E A T K Q Q S P E N D D V V V M R D V P A D G C S P T E S S T
 
AT4G12350.1     N T I D D S I I T H Q N S S N D D Y E L L G D I I H N Y G D L F N I L W T N D E P P L V D D A S W S N H - - N V G I G G
Sb023618_Sorbi1    N T V S T G G S S S S S S G G H D Q D P L - - - - - - - - - - - - V K W L L E E E P P T G D E P W L N F S G S V D V D E
 
AT4G12350.1     T A A V A A S D K N N T A A E E D F P E R S F E K Q N G E S W M F L D Y C Q E F G V E D F G F E C Y H G F G Q S S M K T
Sb023618_Sorbi1    F S S I A A G - - - - - - - - - - - P E - - L L P W D G A T D W L L D Y - Q D F G L G D S A - T L V D G Y M V N N S S N
 
AT4G12350.1     G H K D
Sb023618_Sorbi1    G A K L
 
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