fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb005866 not found in 311aa AT1G66230.1 not_not 0.424347826 III
Sb003360 not found in 298aa AT1G66230.1 not_not 0.424347826 III
Sb010896 not found in 164aa AT1G66230.1 not_not 0.419130434 III
Sb005865 not found in 287aa AT5G16600.1 not_not 0.408695652 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12350.1     MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY
Sb003360_Sorbi1 MGRQPCCDKVGMKKGPWTAEEDQKLVGFLLTHGHCCWRVVPKLAGLLRCGKSCRLRWTNY
Sb005865_Sorbi1 MGRQPCCAKVGLKRGPWTVEEDQKLVTFLLTNGHCCWRAVPKLAGLLRCGKSCRLRWTNY
Sb010896_Sorbi1 MGRQPCCEKVGLKKGPWTAEEDQKLVTFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTNY
Sb005866_Sorbi1 MGRQPCCDKVGLKKGPWTAEEDQKLVTFLLANGHCCWRAVPKLAGLLRCGKSCRLRWTNY
                ******* *: :*:****.***:**: *:*::****** :****** *************

AT4G12350.1     LRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKME
Sb003360_Sorbi1 LRPDLKRGLLSDDEERLVIDLHAQLGNRWSKIAAQLPGRTDNEIKNHWNTHIRKKLLRMG
Sb005865_Sorbi1 LRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLRKMG
Sb010896_Sorbi1 LRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLKKMG
Sb005866_Sorbi1 LRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLRKMG
                ****:******. **  *****  *********::*****************:*** :* 

AT4G12350.1     IDPSTHQPLNKVFT-----------DTNLVDKSETSSKADNVNDNKIVE----IDGTTTN
Sb003360_Sorbi1 IDPVTHLPLQEPPAPPPPPPPPPEQEP---DDQEEEPQQQEQQAGKLMQEG--GAGED--
Sb005865_Sorbi1 IDPVTHKPLHQPASP-PPPPPLTRQEQEEKDT-GGSPEEEEEEE---IVTAI-TAGHDAS
Sb010896_Sorbi1 IDPVTHRPLAQPLAP---------------------PLTQQPRLVRFLQ-----------
Sb005866_Sorbi1 IDPVTHKPLHQPAS----PPPLTRQEQ---DTGGGSPEKEEKEKEKAVVAATPSVGHETF
                *** ** ** :  :                      .  :: .    :            

AT4G12350.1     TIDDSIITHQNSSNDDYELLGDIIHNYGDLFNILWTNDE---PPLVDDASWSNHNVGIGG
Sb003360_Sorbi1 --DVAPMVQPHE-------------------TIMAP------PPP---PTTAASNCG---
Sb005865_Sorbi1 CTDEVPMALLLDD-----------------MDIVLPGDDVVGAQ-------AAACVG---
Sb010896_Sorbi1 ------------------------------------------------------------
Sb005866_Sorbi1 CADEVLMAHLLD-------------------DIVLP------PP-------ATSNSGLTN
                                                                            

AT4G12350.1     TAAVAASDKNNTAAEEDFPE-RSFEKQ---------------NGE--------SWMFLDY
Sb003360_Sorbi1 --SAAVSSASAGSASVVSPSCSSSSASAPAVT----------------GVEATEW--PEP
Sb005865_Sorbi1 --TVYSPESSSSS--------SSYSAS--AAALSGGSSSSSVDGECPDWLPMMDW--PEP
Sb010896_Sorbi1 -------------------------------------------------IESIERFSIEM
Sb005866_Sorbi1 DTTASSPDSSSSSSSSSSSSPSSYSASVPAAASSSGGSSGADDGEWPEWPQVMEW--PES
                                                                     .    : 

AT4G12350.1     CQEFGVEDF-----------GFE--------------------CYHGFGQSSMKTGHKD-
Sb003360_Sorbi1 VYLFGMDGIMDAG----WAGLFPSTGAGAGGCFGLGGVDPFD-QYPGVGVGGAGFDQ---
Sb005865_Sorbi1 IWQL--EDVVTA--RTPWE--FE---------------DPFV--YQRIALF----DHQET
Sb010896_Sorbi1 VYKFV-------------------------------------------------------
Sb005866_Sorbi1 TMWL--DDVVTTGPATAWE--FE---------------DPFVITYQRIDLFDDHDDQQET
                   :                                                        

AT4G12350.1     -----------
Sb003360_Sorbi1 ---DDGHWM--
Sb005865_Sorbi1 F----------
Sb010896_Sorbi1 -----------
Sb005866_Sorbi1 WNNDDGRVELF
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T N Y
Sb003360_Sorbi1    M G R Q P C C D K V G M K K G P W T A E E D Q K L V G F L L T H G H C C W R V V P K L A G L L R C G K S C R L R W T N Y
Sb005865_Sorbi1    M G R Q P C C A K V G L K R G P W T V E E D Q K L V T F L L T N G H C C W R A V P K L A G L L R C G K S C R L R W T N Y
Sb010896_Sorbi1    M G R Q P C C E K V G L K K G P W T A E E D Q K L V T F L L S H G H C C W R L V P K L A G L L R C G K S C R L R W T N Y
Sb005866_Sorbi1    M G R Q P C C D K V G L K K G P W T A E E D Q K L V T F L L A N G H C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT4G12350.1     L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K M E
Sb003360_Sorbi1    L R P D L K R G L L S D D E E R L V I D L H A Q L G N R W S K I A A Q L P G R T D N E I K N H W N T H I R K K L L R M G
Sb005865_Sorbi1    L R P D V K R G L L S S E E E R T V I D L H E Q L G N R W S K I A S Q L P G R T D N E I K N H W N T H I K K K L R K M G
Sb010896_Sorbi1    L R P D L K R G L L S E E E E A L V I D L H A Q L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L K K M G
Sb005866_Sorbi1    L R P D V K R G L L S S E E E R T V I D L H E Q L G N R W S K I A S Q L P G R T D N E I K N H W N T H I K K K L R K M G
 
AT4G12350.1     I D P S T H Q P L N K V F T - - - - - - - - - - - D T N L V D K S E T S S K A D N V N D N K I V E - - - - I D G T T T N
Sb003360_Sorbi1    I D P V T H L P L Q E P P A P P P P P P P P P E Q E P - - - D D Q E E E P Q Q Q E Q Q A G K L M Q E G - - G A G E D - -
Sb005865_Sorbi1    I D P V T H K P L H Q P A S P - P P P P P L T R Q E Q E E K D T - G G S P E E E E E E E - - - I V T A I - T A G H D A S
Sb010896_Sorbi1    I D P V T H R P L A Q P L A P - - - - - - - - - - - - - - - - - - - - - P L T Q Q P R L V R F L Q - - - - - - - - - - -
Sb005866_Sorbi1    I D P V T H K P L H Q P A S - - - - P P P L T R Q E Q - - - D T G G G S P E K E E K E K E K A V V A A T P S V G H E T F
 
AT4G12350.1     T I D D S I I T H Q N S S N D D Y E L L G D I I H N Y G D L F N I L W T N D E - - - P P L V D D A S W S N H N V G I G G
Sb003360_Sorbi1    - - D V A P M V Q P H E - - - - - - - - - - - - - - - - - - - T I M A P - - - - - - P P P - - - P T T A A S N C G - - -
Sb005865_Sorbi1    C T D E V P M A L L L D D - - - - - - - - - - - - - - - - - M D I V L P G D D V V G A Q - - - - - - - A A A C V G - - -
Sb010896_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb005866_Sorbi1    C A D E V L M A H L L D - - - - - - - - - - - - - - - - - - - D I V L P - - - - - - P P - - - - - - - A T S N S G L T N
 
AT4G12350.1     T A A V A A S D K N N T A A E E D F P E - R S F E K Q - - - - - - - - - - - - - - - N G E - - - - - - - - S W M F L D Y
Sb003360_Sorbi1    - - S A A V S S A S A G S A S V V S P S C S S S S A S A P A V T - - - - - - - - - - - - - - - - G V E A T E W - - P E P
Sb005865_Sorbi1    - - T V Y S P E S S S S S - - - - - - - - S S Y S A S - - A A A L S G G S S S S S V D G E C P D W L P M M D W - - P E P
Sb010896_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I E S I E R F S I E M
Sb005866_Sorbi1    D T T A S S P D S S S S S S S S S S S S P S S Y S A S V P A A A S S S G G S S G A D D G E W P E W P Q V M E W - - P E S
 
AT4G12350.1     C Q E F G V E D F - - - - - - - - - - - G F E - - - - - - - - - - - - - - - - - - - - C Y H G F G Q S S M K T G H K D -
Sb003360_Sorbi1    V Y L F G M D G I M D A G - - - - W A G L F P S T G A G A G G C F G L G G V D P F D - Q Y P G V G V G G A G F D Q - - -
Sb005865_Sorbi1    I W Q L - - E D V V T A - - R T P W E - - F E - - - - - - - - - - - - - - - D P F V - - Y Q R I A L F - - - - D H Q E T
Sb010896_Sorbi1    V Y K F V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb005866_Sorbi1    T M W L - - D D V V T T G P A T A W E - - F E - - - - - - - - - - - - - - - D P F V I T Y Q R I D L F D D H D D Q Q E T
 
AT4G12350.1     - - - - - - - - - - -
Sb003360_Sorbi1    - - - D D G H W M - -
Sb005865_Sorbi1    F - - - - - - - - - -
Sb010896_Sorbi1    - - - - - - - - - - -
Sb005866_Sorbi1    W N N D D G R V E L F
 
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