fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023618 not found in 488aa AT4G22680.1 1st_not 0.453913043 II
Sb005866 not found in 311aa AT1G66230.1 not_not 0.424347826 III
Sb003360 not found in 298aa AT1G66230.1 not_not 0.424347826 III
Sb010896 not found in 164aa AT1G66230.1 not_not 0.419130434 III
Sb005865 not found in 287aa AT5G16600.1 not_not 0.408695652 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12350.1     --MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWT
Sb023618_Sorbi1 FGMGRQPCCDKLGVKRGPWTAEEDRKLINFILTNGHCCWRAVPKLAGLLRCGKSCRLRWT
Sb005866_Sorbi1 --MGRQPCCDKVGLKKGPWTAEEDQKLVTFLLANGHCCWRAVPKLAGLLRCGKSCRLRWT
Sb010896_Sorbi1 --MGRQPCCEKVGLKKGPWTAEEDQKLVTFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWT
Sb005865_Sorbi1 --MGRQPCCAKVGLKRGPWTVEEDQKLVTFLLTNGHCCWRAVPKLAGLLRCGKSCRLRWT
Sb003360_Sorbi1 --MGRQPCCDKVGMKKGPWTAEEDQKLVGFLLTHGHCCWRVVPKLAGLLRCGKSCRLRWT
                  ******* *: :*:****.***:**: *:*::****** :****** ***********

AT4G12350.1     NYLRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLK
Sb023618_Sorbi1 NYLRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIK
Sb005866_Sorbi1 NYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLRK
Sb010896_Sorbi1 NYLRPDLKRGLLSEEEEALVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLKK
Sb005865_Sorbi1 NYLRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLRK
Sb003360_Sorbi1 NYLRPDLKRGLLSDDEERLVIDLHAQLGNRWSKIAAQLPGRTDNEIKNHWNTHIRKKLLR
                ******:*****:. **  *****  *********::*****************:*** :

AT4G12350.1     MEIDPSTHQPLNKVFTDTN------------LVDKSETSSKADNVNDNKIVE----IDGT
Sb023618_Sorbi1 MGIDPVTHEPLDRKTSS---SPATTSQSAKSDEATKQQSPEND-----------------
Sb005866_Sorbi1 MGIDPVTHKPLHQPAS----PPPLTRQEQ----DTGGGSPEKEEKEKEKAVVAATPSVGH
Sb010896_Sorbi1 MGIDPVTHRPLAQPLAP----------------------PLTQQPRLVRFLQ--------
Sb005865_Sorbi1 MGIDPVTHKPLHQPASP-PPPPPLTRQEQE-EKDT-GGSPEEEEEEE---IVTAI-TAGH
Sb003360_Sorbi1 MGIDPVTHLPLQEPPAPPPPPPPPPEQEP----DDQEEEPQQQEQQAGKLMQEG--GAGE
                * *** ** ** .  :                       .  :                 

AT4G12350.1     TTNTIDDSIITHQNSSNDDYELLGDIIHNYGDLFNILWTNDE---PPLVDDASWSNHNVG
Sb023618_Sorbi1 -----DVVVMR-----------------------DV--PADGC--SP-------TESSTN
Sb005866_Sorbi1 ETFCADEVLMAHLLD-------------------DIVLP------PP-------ATSNSG
Sb010896_Sorbi1 ------------------------------------------------------------
Sb005865_Sorbi1 DASCTDEVPMALLLDD-----------------MDIVLPGDDVVGAQ-------AAACVG
Sb003360_Sorbi1 D----DVAPMVQPHE-------------------TIMAP------PPP---PTTAASNCG
                                                                            

AT4G12350.1     IGG--TAAVAASDKNNTAAEEDFPERSFEK------QNGES----------------WMF
Sb023618_Sorbi1 -----TVSTGGSSSSS--------------------SGGH----------DQDPLVKWLL
Sb005866_Sorbi1 LTNDTTASSPDSSSSSSSSSSSSPSSYSASVPAAASSSGGSSGADDGEWPEWPQVMEW--
Sb010896_Sorbi1 ----------------------------------------------------IESIERF-
Sb005865_Sorbi1 -----TVYSPESSSSS--------SSYSAS--AAALSGGSSSSSVDGECPDWLPMMDW--
Sb003360_Sorbi1 -----SAAVSSASAGSASVVSPSCSSSSASAPAVT----------------GVEATEW--
                                                                            

AT4G12350.1     -------LDYCQEFG----VEDFG--------------FE--------------------
Sb023618_Sorbi1 EEEPPTGDEPWLNFSGSVDVDEFSSIAAGPELLPWD----------------GATDWLL-
Sb005866_Sorbi1 -------PESTMWL------DDV--VTTGP-ATAWE--FE---------------DPFVI
Sb010896_Sorbi1 ------SIEMVYKFV---------------------------------------------
Sb005865_Sorbi1 -------PEPIWQL------EDV--VTA---RTPWE--FE---------------DPFV-
Sb003360_Sorbi1 -------PEPVYLFG----MDGI--MDAG-----WAGLFPSTGAGAGGCFGLGGVDPFD-
                        :    :                                              

AT4G12350.1     CYHGFG-------QSSMKTGHKD-------
Sb023618_Sorbi1 DYQDFGLGDSATLVDGYMVNNSSNGAKL--
Sb005866_Sorbi1 TYQRIDLFDDH--DDQQETWNNDDGRVELF
Sb010896_Sorbi1 ------------------------------
Sb005865_Sorbi1 -YQRIALF------DHQETF----------
Sb003360_Sorbi1 QYPGVGVGGAG--FDQ------DDGHWM--
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     - - M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T
Sb023618_Sorbi1    F G M G R Q P C C D K L G V K R G P W T A E E D R K L I N F I L T N G H C C W R A V P K L A G L L R C G K S C R L R W T
Sb005866_Sorbi1    - - M G R Q P C C D K V G L K K G P W T A E E D Q K L V T F L L A N G H C C W R A V P K L A G L L R C G K S C R L R W T
Sb010896_Sorbi1    - - M G R Q P C C E K V G L K K G P W T A E E D Q K L V T F L L S H G H C C W R L V P K L A G L L R C G K S C R L R W T
Sb005865_Sorbi1    - - M G R Q P C C A K V G L K R G P W T V E E D Q K L V T F L L T N G H C C W R A V P K L A G L L R C G K S C R L R W T
Sb003360_Sorbi1    - - M G R Q P C C D K V G M K K G P W T A E E D Q K L V G F L L T H G H C C W R V V P K L A G L L R C G K S C R L R W T
 
AT4G12350.1     N Y L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K
Sb023618_Sorbi1    N Y L R P D L K R G L L T D A E E Q V V I D L H G K L G N R W S K I A A K L P G R T D N E I K N H W N T H I K K K L I K
Sb005866_Sorbi1    N Y L R P D V K R G L L S S E E E R T V I D L H E Q L G N R W S K I A S Q L P G R T D N E I K N H W N T H I K K K L R K
Sb010896_Sorbi1    N Y L R P D L K R G L L S E E E E A L V I D L H A Q L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L K K
Sb005865_Sorbi1    N Y L R P D V K R G L L S S E E E R T V I D L H E Q L G N R W S K I A S Q L P G R T D N E I K N H W N T H I K K K L R K
Sb003360_Sorbi1    N Y L R P D L K R G L L S D D E E R L V I D L H A Q L G N R W S K I A A Q L P G R T D N E I K N H W N T H I R K K L L R
 
AT4G12350.1     M E I D P S T H Q P L N K V F T D T N - - - - - - - - - - - - L V D K S E T S S K A D N V N D N K I V E - - - - I D G T
Sb023618_Sorbi1    M G I D P V T H E P L D R K T S S - - - S P A T T S Q S A K S D E A T K Q Q S P E N D - - - - - - - - - - - - - - - - -
Sb005866_Sorbi1    M G I D P V T H K P L H Q P A S - - - - P P P L T R Q E Q - - - - D T G G G S P E K E E K E K E K A V V A A T P S V G H
Sb010896_Sorbi1    M G I D P V T H R P L A Q P L A P - - - - - - - - - - - - - - - - - - - - - - P L T Q Q P R L V R F L Q - - - - - - - -
Sb005865_Sorbi1    M G I D P V T H K P L H Q P A S P - P P P P P L T R Q E Q E - E K D T - G G S P E E E E E E E - - - I V T A I - T A G H
Sb003360_Sorbi1    M G I D P V T H L P L Q E P P A P P P P P P P P P E Q E P - - - - D D Q E E E P Q Q Q E Q Q A G K L M Q E G - - G A G E
 
AT4G12350.1     T T N T I D D S I I T H Q N S S N D D Y E L L G D I I H N Y G D L F N I L W T N D E - - - P P L V D D A S W S N H N V G
Sb023618_Sorbi1    - - - - - D V V V M R - - - - - - - - - - - - - - - - - - - - - - - D V - - P A D G C - - S P - - - - - - - T E S S T N
Sb005866_Sorbi1    E T F C A D E V L M A H L L D - - - - - - - - - - - - - - - - - - - D I V L P - - - - - - P P - - - - - - - A T S N S G
Sb010896_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb005865_Sorbi1    D A S C T D E V P M A L L L D D - - - - - - - - - - - - - - - - - M D I V L P G D D V V G A Q - - - - - - - A A A C V G
Sb003360_Sorbi1    D - - - - D V A P M V Q P H E - - - - - - - - - - - - - - - - - - - T I M A P - - - - - - P P P - - - P T T A A S N C G
 
AT4G12350.1     I G G - - T A A V A A S D K N N T A A E E D F P E R S F E K - - - - - - Q N G E S - - - - - - - - - - - - - - - - W M F
Sb023618_Sorbi1    - - - - - T V S T G G S S S S S - - - - - - - - - - - - - - - - - - - - S G G H - - - - - - - - - - D Q D P L V K W L L
Sb005866_Sorbi1    L T N D T T A S S P D S S S S S S S S S S S S P S S Y S A S V P A A A S S S G G S S G A D D G E W P E W P Q V M E W - -
Sb010896_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I E S I E R F -
Sb005865_Sorbi1    - - - - - T V Y S P E S S S S S - - - - - - - - S S Y S A S - - A A A L S G G S S S S S V D G E C P D W L P M M D W - -
Sb003360_Sorbi1    - - - - - S A A V S S A S A G S A S V V S P S C S S S S A S A P A V T - - - - - - - - - - - - - - - - G V E A T E W - -
 
AT4G12350.1     - - - - - - - L D Y C Q E F G - - - - V E D F G - - - - - - - - - - - - - - F E - - - - - - - - - - - - - - - - - - - -
Sb023618_Sorbi1    E E E P P T G D E P W L N F S G S V D V D E F S S I A A G P E L L P W D - - - - - - - - - - - - - - - - G A T D W L L -
Sb005866_Sorbi1    - - - - - - - P E S T M W L - - - - - - D D V - - V T T G P - A T A W E - - F E - - - - - - - - - - - - - - - D P F V I
Sb010896_Sorbi1    - - - - - - S I E M V Y K F V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb005865_Sorbi1    - - - - - - - P E P I W Q L - - - - - - E D V - - V T A - - - R T P W E - - F E - - - - - - - - - - - - - - - D P F V -
Sb003360_Sorbi1    - - - - - - - P E P V Y L F G - - - - M D G I - - M D A G - - - - - W A G L F P S T G A G A G G C F G L G G V D P F D -
 
AT4G12350.1     C Y H G F G - - - - - - - Q S S M K T G H K D - - - - - - -
Sb023618_Sorbi1    D Y Q D F G L G D S A T L V D G Y M V N N S S N G A K L - -
Sb005866_Sorbi1    T Y Q R I D L F D D H - - D D Q Q E T W N N D D G R V E L F
Sb010896_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb005865_Sorbi1    - Y Q R I A L F - - - - - - D H Q E T F - - - - - - - - - -
Sb003360_Sorbi1    Q Y P G V G V G G A G - - F D Q - - - - - - D D G H W M - -
 
0