fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002162 not found in 286aa AT4G22680.1 1st_not 0.514782608 II
Gm046979 not found in 274aa AT4G12350.1 not_1st 0.500869565 II
Gm046978 not found in 274aa AT4G12350.1 not_1st 0.500869565 II
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12350.1     -----------------MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKL
gm002162_Glyma0 MVDVLVRVTLHWLLASGMGRQPCCDKLGVKKGPWTAEEDKKLINFILSNGQCCWRAVPKL
gm046978_Glyma1 -----------------MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKL
gm046979_Glyma1 -----------------MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKL
                                 ********** *******************:**:*****:***

AT4G12350.1     AGLRRCGKSCRLRWTNYLRPDLKRGLLSDAEEQLVIDLHALLGNRWSKIAARLPGRTDNE
gm002162_Glyma0 AGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNE
gm046978_Glyma1 AGLKRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNE
gm046979_Glyma1 AGLKRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNE
                ***:***********************::*********** *******************

AT4G12350.1     IKNHWNTHIKKKLLKMEIDPSTHQPLNKV--FTDTN-LVDKSETSSKADNVNDNKIVEID
gm002162_Glyma0 IKNHWNTHIKKKLLKMGIDPVTHEPLNKQ--VSSKD-SSSPAEHFSQVNNINIHQVEQND
gm046978_Glyma1 IKNHWNTHIKKKLLKIGIDPVTHEPLKKQAAASSQDSSSSPAEHLPQPGNNLDDQVKETE
gm046979_Glyma1 IKNHWNTHIKKKLLKIGIDPVTHEPLKKQAAASSQDSSSSPAEHLPQPGNNLDDQVKETE
                ***************: *** **:**:*    :. :   . :*  .: .*   .:: : :

AT4G12350.1     GTTTNTIDDSIITHQNSSNDDYELLGDIIHNYGDLFNILWTNDEPPLVDDASW-------
gm002162_Glyma0 GV-LNSEENSTSSPAENSSGEESLLVDSICSDVSLINSMWL-DETPLM-DTLWDNTPKVE
gm046978_Glyma1 GILLNSEENSSSSQAENSSGDDSLLLDSICSDDSLLNSMWL-DETPLV-EALWDTTPNLE
gm046979_Glyma1 GILLNSEENSSSSQAENSSGDDSLLLDSICSDDSLLNSMWL-DETPLV-EALWDTTPNLE
                *   *: ::*  :  :.*..: .** * * .  .*:* :*  **.**: :: *       

AT4G12350.1     -SNHNVGIGGTAAVAASDKNNTAAEEDFPERSFEKQNGESWMFLDYCQEFGVEDFGFECY
gm002162_Glyma0 NANNNMG-------LPIGEDNCA-----------------WL-LD-CQDFGIHDFGFNCF
gm046978_Glyma1 NTSNNMGL------LPSWEDNCA-----------------WL-LD-CQDFGIHDFGFTCF
gm046979_Glyma1 NTSNNMGL------LPSWEDNCA-----------------WL-LD-CQDFGIHDFGFTCF
                 :.:*:*        .  ::* *                 *: ** **:**:.**** *:

AT4G12350.1     HGFGQSSMKT------GHKD
gm002162_Glyma0 SEVETNVLQAIGMDRKGL--
gm046978_Glyma1 NEIESHALQTIGMKEEGH--
gm046979_Glyma1 NEIESHALQTIGMKEEGH--
                  .    :::      *
BoxShade v3.31 C (beta, 970507) Output
AT4G12350.1     - - - - - - - - - - - - - - - - - M G R Q P C C D K L M V K K G P W T A E E D K K L I N F I L T N G H C C W R A L P K L
gm002162_Glyma0    M V D V L V R V T L H W L L A S G M G R Q P C C D K L G V K K G P W T A E E D K K L I N F I L S N G Q C C W R A V P K L
gm046978_Glyma1    - - - - - - - - - - - - - - - - - M G R Q P C C D K L G V K K G P W T A E E D K K L I N F I L T N G Q C C W R A V P K L
gm046979_Glyma1    - - - - - - - - - - - - - - - - - M G R Q P C C D K L G V K K G P W T A E E D K K L I N F I L T N G Q C C W R A V P K L
 
AT4G12350.1     A G L R R C G K S C R L R W T N Y L R P D L K R G L L S D A E E Q L V I D L H A L L G N R W S K I A A R L P G R T D N E
gm002162_Glyma0    A G L R R C G K S C R L R W T N Y L R P D L K R G L L T Q A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E
gm046978_Glyma1    A G L K R C G K S C R L R W T N Y L R P D L K R G L L T E A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E
gm046979_Glyma1    A G L K R C G K S C R L R W T N Y L R P D L K R G L L T E A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E
 
AT4G12350.1     I K N H W N T H I K K K L L K M E I D P S T H Q P L N K V - - F T D T N - L V D K S E T S S K A D N V N D N K I V E I D
gm002162_Glyma0    I K N H W N T H I K K K L L K M G I D P V T H E P L N K Q - - V S S K D - S S S P A E H F S Q V N N I N I H Q V E Q N D
gm046978_Glyma1    I K N H W N T H I K K K L L K I G I D P V T H E P L K K Q A A A S S Q D S S S S P A E H L P Q P G N N L D D Q V K E T E
gm046979_Glyma1    I K N H W N T H I K K K L L K I G I D P V T H E P L K K Q A A A S S Q D S S S S P A E H L P Q P G N N L D D Q V K E T E
 
AT4G12350.1     G T T T N T I D D S I I T H Q N S S N D D Y E L L G D I I H N Y G D L F N I L W T N D E P P L V D D A S W - - - - - - -
gm002162_Glyma0    G V - L N S E E N S T S S P A E N S S G E E S L L V D S I C S D V S L I N S M W L - D E T P L M - D T L W D N T P K V E
gm046978_Glyma1    G I L L N S E E N S S S S Q A E N S S G D D S L L L D S I C S D D S L L N S M W L - D E T P L V - E A L W D T T P N L E
gm046979_Glyma1    G I L L N S E E N S S S S Q A E N S S G D D S L L L D S I C S D D S L L N S M W L - D E T P L V - E A L W D T T P N L E
 
AT4G12350.1     - S N H N V G I G G T A A V A A S D K N N T A A E E D F P E R S F E K Q N G E S W M F L D Y C Q E F G V E D F G F E C Y
gm002162_Glyma0    N A N N N M G - - - - - - - L P I G E D N C A - - - - - - - - - - - - - - - - - W L - L D - C Q D F G I H D F G F N C F
gm046978_Glyma1    N T S N N M G L - - - - - - L P S W E D N C A - - - - - - - - - - - - - - - - - W L - L D - C Q D F G I H D F G F T C F
gm046979_Glyma1    N T S N N M G L - - - - - - L P S W E D N C A - - - - - - - - - - - - - - - - - W L - L D - C Q D F G I H D F G F T C F
 
AT4G12350.1     H G F G Q S S M K T - - - - - - G H K D
gm002162_Glyma0    S E V E T N V L Q A I G M D R K G L - -
gm046978_Glyma1    N E I E S H A L Q T I G M K E E G H - -
gm046979_Glyma1    N E I E S H A L Q T I G M K E E G H - -
 
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