Input
| Putative repression domain
|
|
AT4G12850.2 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt040151 |
not found in 195aa |
AT4G12850.1 |
1st_not |
0.555970149 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G12850.2 MMTGDLKLD----------EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDG
pt040151_POPTR_ -------MDVEEEEEAGIVEPCVGMEFESEDAARKFYSEYARRLGFVVRVMQRRRSGIDG
:* ** **::****: *:.** **::*******:**********
AT4G12850.2 RTLARRLGCNKQGFGPNNQR------SSSSSSSSREGCKATILVKMEKSGKWVVTRFIKE
pt040151_POPTR_ RTLARRLGCNKQGFSPNNRTIVGPGPDKKPRPSAREGCKATILVKMDKSGKWVVTRFEKD
**************.***: .... .*:************:********** *:
AT4G12850.2 HNHSLQFIG---SSSYDSFVRFQSL--------YLWVF----LICFAIT-----------
pt040151_POPTR_ HNHPLVVTASGFSSSGDKDKKIEELTKELEHQDHLCATYREKLVSFMNSIEEQTEELASK
***.* . . *** *. :::.* :* . *:.* :
AT4G12850.2 ----------------------
pt040151_POPTR_ IQLIVDNVRKVESEVQNFSRRR
BoxShade v3.31 C (beta, 970507) Output
AT4G12850.2 |
M |
M |
T |
G |
D |
L |
K |
L |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
E |
P |
Y |
V |
G |
L |
K |
F |
E |
S |
E |
E |
E |
A |
K |
D |
F |
Y |
V |
E |
Y |
S |
K |
R |
L |
G |
F |
V |
V |
R |
M |
M |
Q |
R |
R |
R |
S |
G |
I |
D |
G |
pt040151_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
M |
D |
V |
E |
E |
E |
E |
E |
A |
G |
I |
V |
E |
P |
C |
V |
G |
M |
E |
F |
E |
S |
E |
D |
A |
A |
R |
K |
F |
Y |
S |
E |
Y |
A |
R |
R |
L |
G |
F |
V |
V |
R |
V |
M |
Q |
R |
R |
R |
S |
G |
I |
D |
G |
|
AT4G12850.2 |
R |
T |
L |
A |
R |
R |
L |
G |
C |
N |
K |
Q |
G |
F |
G |
P |
N |
N |
Q |
R |
- |
- |
- |
- |
- |
- |
S |
S |
S |
S |
S |
S |
S |
S |
R |
E |
G |
C |
K |
A |
T |
I |
L |
V |
K |
M |
E |
K |
S |
G |
K |
W |
V |
V |
T |
R |
F |
I |
K |
E |
pt040151_POPTR_ |
R |
T |
L |
A |
R |
R |
L |
G |
C |
N |
K |
Q |
G |
F |
S |
P |
N |
N |
R |
T |
I |
V |
G |
P |
G |
P |
D |
K |
K |
P |
R |
P |
S |
A |
R |
E |
G |
C |
K |
A |
T |
I |
L |
V |
K |
M |
D |
K |
S |
G |
K |
W |
V |
V |
T |
R |
F |
E |
K |
D |
|
AT4G12850.2 |
H |
N |
H |
S |
L |
Q |
F |
I |
G |
- |
- |
- |
S |
S |
S |
Y |
D |
S |
F |
V |
R |
F |
Q |
S |
L |
- |
- |
- |
- |
- |
- |
- |
- |
Y |
L |
W |
V |
F |
- |
- |
- |
- |
L |
I |
C |
F |
A |
I |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt040151_POPTR_ |
H |
N |
H |
P |
L |
V |
V |
T |
A |
S |
G |
F |
S |
S |
S |
G |
D |
K |
D |
K |
K |
I |
E |
E |
L |
T |
K |
E |
L |
E |
H |
Q |
D |
H |
L |
C |
A |
T |
Y |
R |
E |
K |
L |
V |
S |
F |
M |
N |
S |
I |
E |
E |
Q |
T |
E |
E |
L |
A |
S |
K |
|
AT4G12850.2 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt040151_POPTR_ |
I |
Q |
L |
I |
V |
D |
N |
V |
R |
K |
V |
E |
S |
E |
V |
Q |
N |
F |
S |
R |
R |
R |
|
|