fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12850.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018076 not found in 215aa AT4G12850.1 not_not 0.541044776 III
Pt018075 not found in 224aa AT4G12850.1 not_not 0.541044776 III
Pt003434 not found in 185aa AT2G43280.1 not_not 0.432835820 III
Pt016097 not found in 171aa AT3G07500.1 not_not 0.410447761 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12850.2     ------------------MMTGDL-----------------------KLDEPYVGLKFES
pt018075_POPTR_ ----MIDPGDPGKTCDPNLKPVDLDKGVVDTST---CCVEEEETVGDGIAEPDVGMEFES
pt018076_POPTR_ ----MIDPGDPGKTCDPNLKPVDLDKGVVDTST---CCVEEEETVGDGIAEPDVGMEFES
pt003434_POPTR_ -----------------------------------------------MVVEPHEGMEFES
pt016097_POPTR_ MSQSQMDENASASM----SEDGDMDQ-IVESSNGKELAISEAS----SDMEPCVGMEFES
                                                                  **  *::***

AT4G12850.2     EEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQRS----SSSS
pt018075_POPTR_ EDAARRFYTEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNHRTDVGPDKKPR
pt018076_POPTR_ EDAARRFYTEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNHRTDVGPDKKPR
pt003434_POPTR_ EDAAKIFYDEYARRIGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGNVRKPR
pt016097_POPTR_ EEAAKVFYDAYATHVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFR-KLRPRRSENRKPR
                *: *: **  *: ::** :*:   ***  **: : *** ***:*:  . :       .. 

AT4G12850.2     SSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIG----------------------
pt018075_POPTR_ PGARDGCKATILVKMEKSGKWVVTRFEKDHNHPLVVTT-SGFSSSGGKDKKIEELTQELE
pt018076_POPTR_ PGARDGCKATILVKMEKSGKWVVTRFEKDHNHPLV----------GGKDKKIEELTQELE
pt003434_POPTR_ PSTREGCKAMIHVKFDKSGKWVITKFVKDHNHPLVVAPREARQTLDEKDKKIQELTAELR
pt016097_POPTR_ AVTREGCKAMIVVKKEKAGKWVVTRFVKEHNHPLVPTPANGRRT----------------
                . :*:**** * ** :*:****:*:* *:***.*                          

AT4G12850.2     -----SSSYD----SFVRF-----QSLYLWVFLICFAIT-------------
pt018075_POPTR_ HQEQLCATYREKLLSFMNNVVEEAEELASKIQVIVDSVRKVESEVQKFSRHG
pt018076_POPTR_ HQEQLCATYREKLLSFMNNVVEEAEELASKIQVIVDSVRKVESEVQKFSRHG
pt003434_POPTR_ NKKRLCATYQEQLSAFVKIVEDHSEKLSKKVKNAVENLKEFESIEQELMQHT
pt016097_POPTR_ ------------------VLLSQTPILLSVIVLEC-----------------
                                          *   :
BoxShade v3.31 C (beta, 970507) Output
AT4G12850.2     - - - - - - - - - - - - - - - - - - M M T G D L - - - - - - - - - - - - - - - - - - - - - - - K L D E P Y V G L K F E S
pt018075_POPTR_    - - - - M I D P G D P G K T C D P N L K P V D L D K G V V D T S T - - - C C V E E E E T V G D G I A E P D V G M E F E S
pt018076_POPTR_    - - - - M I D P G D P G K T C D P N L K P V D L D K G V V D T S T - - - C C V E E E E T V G D G I A E P D V G M E F E S
pt003434_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V V E P H E G M E F E S
pt016097_POPTR_    M S Q S Q M D E N A S A S M - - - - S E D G D M D Q - I V E S S N G K E L A I S E A S - - - - S D M E P C V G M E F E S
 
AT4G12850.2     E E E A K D F Y V E Y S K R L G F V V R M M Q R R R S G I D G R T L A R R L G C N K Q G F G P N N Q R S - - - - S S S S
pt018075_POPTR_    E D A A R R F Y T E Y A R R V G F A V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N H R T D V G P D K K P R
pt018076_POPTR_    E D A A R R F Y T E Y A R R V G F A V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N H R T D V G P D K K P R
pt003434_POPTR_    E D A A K I F Y D E Y A R R I G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R G K F G N V R K P R
pt016097_POPTR_    E E A A K V F Y D A Y A T H V G F I M R V D A F R R S M R D G K V V W R R L V C N K E G F R - K L R P R R S E N R K P R
 
AT4G12850.2     S S S R E G C K A T I L V K M E K S G K W V V T R F I K E H N H S L Q F I G - - - - - - - - - - - - - - - - - - - - - -
pt018075_POPTR_    P G A R D G C K A T I L V K M E K S G K W V V T R F E K D H N H P L V V T T - S G F S S S G G K D K K I E E L T Q E L E
pt018076_POPTR_    P G A R D G C K A T I L V K M E K S G K W V V T R F E K D H N H P L V - - - - - - - - - - G G K D K K I E E L T Q E L E
pt003434_POPTR_    P S T R E G C K A M I H V K F D K S G K W V I T K F V K D H N H P L V V A P R E A R Q T L D E K D K K I Q E L T A E L R
pt016097_POPTR_    A V T R E G C K A M I V V K K E K A G K W V V T R F V K E H N H P L V P T P A N G R R T - - - - - - - - - - - - - - - -
 
AT4G12850.2     - - - - - S S S Y D - - - - S F V R F - - - - - Q S L Y L W V F L I C F A I T - - - - - - - - - - - - -
pt018075_POPTR_    H Q E Q L C A T Y R E K L L S F M N N V V E E A E E L A S K I Q V I V D S V R K V E S E V Q K F S R H G
pt018076_POPTR_    H Q E Q L C A T Y R E K L L S F M N N V V E E A E E L A S K I Q V I V D S V R K V E S E V Q K F S R H G
pt003434_POPTR_    N K K R L C A T Y Q E Q L S A F V K I V E D H S E K L S K K V K N A V E N L K E F E S I E Q E L M Q H T
pt016097_POPTR_    - - - - - - - - - - - - - - - - - - V L L S Q T P I L L S V I V L E C - - - - - - - - - - - - - - - - -
 
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