fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12850.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040151 not found in 195aa AT4G12850.1 1st_not 0.555970149 II
Pt018076 not found in 215aa AT4G12850.1 not_not 0.541044776 III
Pt018075 not found in 224aa AT4G12850.1 not_not 0.541044776 III
Pt003434 not found in 185aa AT2G43280.1 not_not 0.432835820 III
Pt016097 not found in 171aa AT3G07500.1 not_not 0.410447761 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12850.2     --------------MMTGD--------LK---LD-------------------------E
pt016097_POPTR_ MSQSQMDENASASMSEDGD-------------MDQ-IVESSNGKELAISEAS----SDME
pt018076_POPTR_ -------------MIDPGDPGKTCDPNLKPVDLDKGVVDTST---CCVEEEETVGDGIAE
pt018075_POPTR_ -------------MIDPGDPGKTCDPNLKPVDLDKGVVDTST---CCVEEEETVGDGIAE
pt040151_POPTR_ --------------------------------MD-------------VEEEEEA--GIVE
pt003434_POPTR_ --------------------------------------------------------MVVE
                                                                           *

AT4G12850.2     PYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQR
pt016097_POPTR_ PCVGMEFESEEAAKVFYDAYATHVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPR
pt018076_POPTR_ PDVGMEFESEDAARRFYTEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNHRT
pt018075_POPTR_ PDVGMEFESEDAARRFYTEYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSPNHRT
pt040151_POPTR_ PCVGMEFESEDAARKFYSEYARRLGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNNRT
pt003434_POPTR_ PHEGMEFESEDAAKIFYDEYARRIGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRG
                *  *::****: *: **  *: ::** :*:   ***  **: : *** ***:*:      

AT4G12850.2     SS------SSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIG----SSSYDSF
pt016097_POPTR_ RS---ENRKPRAVTREGCKAMIVVKKEKAGKWVVTRFVKEHNHPLVPTPANGRRT-----
pt018076_POPTR_ DV--GPDKKPRPGARDGCKATILVKMEKSGKWVVTRFEKDHNHPLV----------GGKD
pt018075_POPTR_ DV--GPDKKPRPGARDGCKATILVKMEKSGKWVVTRFEKDHNHPLVVTT-SGFSSSGGKD
pt040151_POPTR_ IVGPGPDKKPRPSAREGCKATILVKMDKSGKWVVTRFEKDHNHPLVVTA-SGFSSSGDKD
pt003434_POPTR_ KF--GNVRKPRPSTREGCKAMIHVKFDKSGKWVITKFVKDHNHPLVVAPREARQTLDEKD
                        .. . :*:**** * ** :*:****:*:* *:***.*               

AT4G12850.2     VRFQSLY----------------LWVFL-------------ICFAIT-------------
pt016097_POPTR_ -----------------------------VLLSQTPILLSVIVLEC--------------
pt018076_POPTR_ KKIEELTQELEHQEQLCATYREKLLSFMNNVVEEAEELASKIQVIVDSVRKVESEVQKFS
pt018075_POPTR_ KKIEELTQELEHQEQLCATYREKLLSFMNNVVEEAEELASKIQVIVDSVRKVESEVQKFS
pt040151_POPTR_ KKIEELTKELEHQDHLCATYREKLVSFMNSIEEQTEELASKIQLIVDNVRKVESEVQNFS
pt003434_POPTR_ KKIQELTAELRNKKRLCATYQEQLSAFVKIVEDHSEKLSKKVKNAVENLKEFESIEQELM
                                                         :                  

AT4G12850.2     ---
pt016097_POPTR_ ---
pt018076_POPTR_ RHG
pt018075_POPTR_ RHG
pt040151_POPTR_ RRR
pt003434_POPTR_ QHT
BoxShade v3.31 C (beta, 970507) Output
AT4G12850.2     - - - - - - - - - - - - - - M M T G D - - - - - - - - L K - - - L D - - - - - - - - - - - - - - - - - - - - - - - - - E
pt016097_POPTR_    M S Q S Q M D E N A S A S M S E D G D - - - - - - - - - - - - - M D Q - I V E S S N G K E L A I S E A S - - - - S D M E
pt018076_POPTR_    - - - - - - - - - - - - - M I D P G D P G K T C D P N L K P V D L D K G V V D T S T - - - C C V E E E E T V G D G I A E
pt018075_POPTR_    - - - - - - - - - - - - - M I D P G D P G K T C D P N L K P V D L D K G V V D T S T - - - C C V E E E E T V G D G I A E
pt040151_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D - - - - - - - - - - - - - V E E E E E A - - G I V E
pt003434_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V V E
 
AT4G12850.2     P Y V G L K F E S E E E A K D F Y V E Y S K R L G F V V R M M Q R R R S G I D G R T L A R R L G C N K Q G F G P N N Q R
pt016097_POPTR_    P C V G M E F E S E E A A K V F Y D A Y A T H V G F I M R V D A F R R S M R D G K V V W R R L V C N K E G F R K L R P R
pt018076_POPTR_    P D V G M E F E S E D A A R R F Y T E Y A R R V G F A V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N H R T
pt018075_POPTR_    P D V G M E F E S E D A A R R F Y T E Y A R R V G F A V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N H R T
pt040151_POPTR_    P C V G M E F E S E D A A R K F Y S E Y A R R L G F V V R V M Q R R R S G I D G R T L A R R L G C N K Q G F S P N N R T
pt003434_POPTR_    P H E G M E F E S E D A A K I F Y D E Y A R R I G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R G
 
AT4G12850.2     S S - - - - - - S S S S S S R E G C K A T I L V K M E K S G K W V V T R F I K E H N H S L Q F I G - - - - S S S Y D S F
pt016097_POPTR_    R S - - - E N R K P R A V T R E G C K A M I V V K K E K A G K W V V T R F V K E H N H P L V P T P A N G R R T - - - - -
pt018076_POPTR_    D V - - G P D K K P R P G A R D G C K A T I L V K M E K S G K W V V T R F E K D H N H P L V - - - - - - - - - - G G K D
pt018075_POPTR_    D V - - G P D K K P R P G A R D G C K A T I L V K M E K S G K W V V T R F E K D H N H P L V V T T - S G F S S S G G K D
pt040151_POPTR_    I V G P G P D K K P R P S A R E G C K A T I L V K M D K S G K W V V T R F E K D H N H P L V V T A - S G F S S S G D K D
pt003434_POPTR_    K F - - G N V R K P R P S T R E G C K A M I H V K F D K S G K W V I T K F V K D H N H P L V V A P R E A R Q T L D E K D
 
AT4G12850.2     V R F Q S L Y - - - - - - - - - - - - - - - - L W V F L - - - - - - - - - - - - - I C F A I T - - - - - - - - - - - - -
pt016097_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V L L S Q T P I L L S V I V L E C - - - - - - - - - - - - - -
pt018076_POPTR_    K K I E E L T Q E L E H Q E Q L C A T Y R E K L L S F M N N V V E E A E E L A S K I Q V I V D S V R K V E S E V Q K F S
pt018075_POPTR_    K K I E E L T Q E L E H Q E Q L C A T Y R E K L L S F M N N V V E E A E E L A S K I Q V I V D S V R K V E S E V Q K F S
pt040151_POPTR_    K K I E E L T K E L E H Q D H L C A T Y R E K L V S F M N S I E E Q T E E L A S K I Q L I V D N V R K V E S E V Q N F S
pt003434_POPTR_    K K I Q E L T A E L R N K K R L C A T Y Q E Q L S A F V K I V E D H S E K L S K K V K N A V E N L K E F E S I E Q E L M
 
AT4G12850.2     - - -
pt016097_POPTR_    - - -
pt018076_POPTR_    R H G
pt018075_POPTR_    R H G
pt040151_POPTR_    R R R
pt003434_POPTR_    Q H T
 
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