fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G12850.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049442 not found in 115aa AT4G12850.1 1st_not 0.533582089 II
Gm016867 not found in 241aa AT2G43280.1 not_not 0.447761194 III
Gm016866 not found in 241aa AT2G43280.1 not_not 0.447761194 III
Gm023316 not found in 144aa AT4G12850.1 not_not 0.417910447 III
Gm009577 not found in 176aa AT2G43280.1 not_not 0.410447761 III
Gm009576 not found in 176aa AT2G43280.1 not_not 0.410447761 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G12850.2     ------------MMTGDLKLD---------------------------------------
gm023316_Glyma0 ------------------------------------------------------------
gm049442_Glyma1 ------------------------------------------------------------
gm009577_Glyma0 ------------------------------------------------------------
gm009576_Glyma0 ------------------------------------------------------------
gm016866_Glyma0 MESQLVDGNDDMGVSGDVGLSTYEVQMHQETYEVDPNEECRVLESSSGGEVGICDDHAIQ
gm016867_Glyma0 MESQLVDGNDDMGVSGDVGLSTYEVQMHQETYEVDPNEECRVLESSSGGEVGICDDHAIQ
                                                                            

AT4G12850.2     EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQ
gm023316_Glyma0 -----MEFDSEEDARE----------ICCTIMQRRRFGIDGRTLARRLGCNKQGFSPNNM
gm049442_Glyma1 -----MEFGSEEDARKFYVDYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNK
gm009577_Glyma0 -----MEFESEDAAKLFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIR
gm009576_Glyma0 -----MEFESEDAAKLFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIR
gm016866_Glyma0 EPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIR
gm016867_Glyma0 EPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIR
                     ::* **: *:           :   :*. **   *** *********:*:  .  

AT4G12850.2     ----RSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSLQFIGSSSYDS------
gm023316_Glyma0 GILGPEKKLRPSAREGCKATILVKLEKSGKWVVTRFVKDHNHPL--IATANGFSTASLS-
gm049442_Glyma1 GILGPEKKPRPSAREGCKATILVKFEKSGKWIVTRFVKDHNHPL--IATANGFSTAV---
gm009577_Glyma0 GKFASVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPL-VVSPREARQTMDEKD
gm009576_Glyma0 GKFASVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPL-VVSPREARQTMDEKD
gm016866_Glyma0 GKFSSVRKPRASTREGCKAMIHIKYNKSGKWVITKFVKDHNHPL-VVSPREARQTMDEKD
gm016867_Glyma0 GKFSSVRKPRASTREGCKAMIHIKYNKSGKWVITKFVKDHNHPL-VVSPREARQTMDEKD
                       .  .*:****** * :* :*****::*:*:*:***.*  :.. .  .      

AT4G12850.2     -------------------FVRFQSLYLWV----------------------------FL
gm023316_Glyma0 KCIAELLNSINI------IFVEYYEIFIIVR-----------------FREY--LDNFFF
gm049442_Glyma1 -------------------------SFLLV------------------------------
gm009577_Glyma0 KKIQELTAELRLKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLH
gm009576_Glyma0 KKIQELTAELRLKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLH
gm016866_Glyma0 KKIQELTAELRHKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLH
gm016867_Glyma0 KKIQELTAELRHKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLH
                                          :: :                              

AT4G12850.2     ICFAIT-
gm023316_Glyma0 QCIRKSR
gm049442_Glyma1 -------
gm009577_Glyma0 QT-----
gm009576_Glyma0 QT-----
gm016866_Glyma0 QT-----
gm016867_Glyma0 QT-----
BoxShade v3.31 C (beta, 970507) Output
AT4G12850.2     - - - - - - - - - - - - M M T G D L K L D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023316_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm049442_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm009577_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm009576_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm016866_Glyma0    M E S Q L V D G N D D M G V S G D V G L S T Y E V Q M H Q E T Y E V D P N E E C R V L E S S S G G E V G I C D D H A I Q
gm016867_Glyma0    M E S Q L V D G N D D M G V S G D V G L S T Y E V Q M H Q E T Y E V D P N E E C R V L E S S S G G E V G I C D D H A I Q
 
AT4G12850.2     E P Y V G L K F E S E E E A K D F Y V E Y S K R L G F V V R M M Q R R R S G I D G R T L A R R L G C N K Q G F G P N N Q
gm023316_Glyma0    - - - - - M E F D S E E D A R E - - - - - - - - - - I C C T I M Q R R R F G I D G R T L A R R L G C N K Q G F S P N N M
gm049442_Glyma1    - - - - - M E F G S E E D A R K F Y V D Y A R R V G F V V R I M Q R R R S G I D G R T L A R R L G C N K Q G F S P N N K
gm009577_Glyma0    - - - - - M E F E S E D A A K L F Y D E Y A R R L G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R
gm009576_Glyma0    - - - - - M E F E S E D A A K L F Y D E Y A R R L G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R
gm016866_Glyma0    E P Y E G M E F E S E D A A K I F Y D E Y A R R L G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R
gm016867_Glyma0    E P Y E G M E F E S E D A A K I F Y D E Y A R R L G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R
 
AT4G12850.2     - - - - R S S S S S S S S R E G C K A T I L V K M E K S G K W V V T R F I K E H N H S L Q F I G S S S Y D S - - - - - -
gm023316_Glyma0    G I L G P E K K L R P S A R E G C K A T I L V K L E K S G K W V V T R F V K D H N H P L - - I A T A N G F S T A S L S -
gm049442_Glyma1    G I L G P E K K P R P S A R E G C K A T I L V K F E K S G K W I V T R F V K D H N H P L - - I A T A N G F S T A V - - -
gm009577_Glyma0    G K F A S V R K P R A S T R E G C K A M I H I K Y D K S G K W V I T K F V K D H N H P L - V V S P R E A R Q T M D E K D
gm009576_Glyma0    G K F A S V R K P R A S T R E G C K A M I H I K Y D K S G K W V I T K F V K D H N H P L - V V S P R E A R Q T M D E K D
gm016866_Glyma0    G K F S S V R K P R A S T R E G C K A M I H I K Y N K S G K W V I T K F V K D H N H P L - V V S P R E A R Q T M D E K D
gm016867_Glyma0    G K F S S V R K P R A S T R E G C K A M I H I K Y N K S G K W V I T K F V K D H N H P L - V V S P R E A R Q T M D E K D
 
AT4G12850.2     - - - - - - - - - - - - - - - - - - - F V R F Q S L Y L W V - - - - - - - - - - - - - - - - - - - - - - - - - - - - F L
gm023316_Glyma0    K C I A E L L N S I N I - - - - - - I F V E Y Y E I F I I V R - - - - - - - - - - - - - - - - - F R E Y - - L D N F F F
gm049442_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - S F L L V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm009577_Glyma0    K K I Q E L T A E L R L K K R L C A T Y Q E Q L T S F M K I V E E H N E K L S A K I H H V V N N L K E F E S I E E L L H
gm009576_Glyma0    K K I Q E L T A E L R L K K R L C A T Y Q E Q L T S F M K I V E E H N E K L S A K I H H V V N N L K E F E S I E E L L H
gm016866_Glyma0    K K I Q E L T A E L R H K K R L C A T Y Q E Q L T S F M K I V E E H N E K L S A K I H H V V N N L K E F E S I E E L L H
gm016867_Glyma0    K K I Q E L T A E L R H K K R L C A T Y Q E Q L T S F M K I V E E H N E K L S A K I H H V V N N L K E F E S I E E L L H
 
AT4G12850.2     I C F A I T -
gm023316_Glyma0    Q C I R K S R
gm049442_Glyma1    - - - - - - -
gm009577_Glyma0    Q T - - - - -
gm009576_Glyma0    Q T - - - - -
gm016866_Glyma0    Q T - - - - -
gm016867_Glyma0    Q T - - - - -
 
0