fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp002796 not found in 207aa AT4G13040.1 1st_1st 0.351145038 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13040.1     MVSLRRRRLLGLCCGPN-----------GYVTPLPFLTAEEMITGIPNPNARAAYNPGPA
pp002796_Pp1s31 MVSIRKRRHGGL--SPDKKSQSQAYRNSSY--PLP--------TAIP---------AGSL
                ***:*:**  **  .*:           .*  ***        *.**         .*. 

AT4G13040.1     ETVTTVIVEKKAIEERSR-RTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKR
pp002796_Pp1s31 NTDKDSSLKQEVTVSRFRFATLPAIPSFRELHQLYNPVS----LPKEREVKKRKRQRRKH
                :* .   ::::.  .* *  * .    **. :.  .**.     ** :  *:**::***:

AT4G13040.1     VHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFEL
pp002796_Pp1s31 QMNQESCVMRGVYFKNMKWQAAIKVEKKQVHLGTVSSQEEAARLYDRAAYLCGREPNFEL
                  ***.*:*****:***************:****.**************::*********

AT4G13040.1     SEEVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKIN--ASMPHQPEEEEQDSDKM
pp002796_Pp1s31 TEAEKQELQLLRWEEFLELTRQSILSKKRKRGNKNSSGKTTQAASSP-----------KA
                :*   :**:   *****: **::* .** *   ::.. * .  ** *           * 

AT4G13040.1     ---
pp002796_Pp1s31 LIC
BoxShade v3.31 C (beta, 970507) Output
AT4G13040.1     M V S L R R R R L L G L C C G P N - - - - - - - - - - - G Y V T P L P F L T A E E M I T G I P N P N A R A A Y N P G P A
pp002796_Pp1s31    M V S I R K R R H G G L - - S P D K K S Q S Q A Y R N S S Y - - P L P - - - - - - - - T A I P - - - - - - - - - A G S L
 
AT4G13040.1     E T V T T V I V E K K A I E E R S R - R T R S K H M H F R S D Y S D I S P V N S D S I S P K Y Q P P K R R K Q H R R K R
pp002796_Pp1s31    N T D K D S S L K Q E V T V S R F R F A T L P A I P S F R E L H Q L Y N P V S - - - - L P K E R E V K K R K R Q R R K H
 
AT4G13040.1     V H N Q E P C L M R G V Y Y K N M K W Q A A I K V E K K Q I H L G T F S S Q E E A A R L Y D R A A F M C G R E P N F E L
pp002796_Pp1s31    Q M N Q E S C V M R G V Y F K N M K W Q A A I K V E K K Q V H L G T V S S Q E E A A R L Y D R A A Y L C G R E P N F E L
 
AT4G13040.1     S E E V I R E L K Q Q S W E E F L N C T R R T I T N K K P K S R I E H E D T K I N - - A S M P H Q P E E E E Q D S D K M
pp002796_Pp1s31    T E A E K Q E L Q L L R W E E F L E L T R Q S I L S K K R K R G N K N S S G K T T Q A A S S P - - - - - - - - - - - K A
 
AT4G13040.1     - - -
pp002796_Pp1s31    L I C
 
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