fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035652 not found in 261aa AT3G24310.1 1st_not 0.582222222 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13480.1     --------------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKS
pt035652_POPTR_ MSLGVMAGQLRWGGLIEEGWRKGPWTAEEDRLLVEYVRLHGEGRWNSVARLAGLKRNGKS
                              ::** **************:****:*********::**********

AT4G13480.1     CRLRWVNYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHF
pt035652_POPTR_ CRLRWVNYLRPDLKRGQITPHEERIIVELHARWGNRWSTIARSLPGRTDNEIKNYWRTHF
                *********************** **:****:****************************

AT4G13480.1     KKKAKPTTNNAEKIKSRLLKRQHFKEQREIELQQE------QQLFQFDQLGMKKIISLLE
pt035652_POPTR_ KKKAKLSPDNSDKARTHLLKRQQFQQQQQ-QLQQQQQQIQHQQLLQLNQLDMKMIISLLD
                ***** :.:*::* :::*****:*::*:: :***:      ***:*::**.** *****:

AT4G13480.1     ENNSSSSSDGGGDVFYYPDQITHSSKPFGYNSNSLEEQ--LQGRFSPVNIPDANTMNEDN
pt035652_POPTR_ ENENKAP---------HTPQMSQEMAPHAVYPNTTEEHGLLYNMFN-ASVPEAS--NED-
                **:..:.         :. *:::.  *..  .*: **:  * . *. ..:*:*.  *** 

AT4G13480.1     AIWDGFWNMDVVNGHGGNLGVVAATAACGPRKPYFHNLVIPFC
pt035652_POPTR_ ILWDGLWNLDDVH---GNFGV-----ACATSRASMHNLVSPFC
                 :***:**:* *:   **:**     **.. :. :**** ***
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K S
pt035652_POPTR_    M S L G V M A G Q L R W G G L I E E G W R K G P W T A E E D R L L V E Y V R L H G E G R W N S V A R L A G L K R N G K S
 
AT4G13480.1     C R L R W V N Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F
pt035652_POPTR_    C R L R W V N Y L R P D L K R G Q I T P H E E R I I V E L H A R W G N R W S T I A R S L P G R T D N E I K N Y W R T H F
 
AT4G13480.1     K K K A K P T T N N A E K I K S R L L K R Q H F K E Q R E I E L Q Q E - - - - - - Q Q L F Q F D Q L G M K K I I S L L E
pt035652_POPTR_    K K K A K L S P D N S D K A R T H L L K R Q Q F Q Q Q Q Q - Q L Q Q Q Q Q Q I Q H Q Q L L Q L N Q L D M K M I I S L L D
 
AT4G13480.1     E N N S S S S S D G G G D V F Y Y P D Q I T H S S K P F G Y N S N S L E E Q - - L Q G R F S P V N I P D A N T M N E D N
pt035652_POPTR_    E N E N K A P - - - - - - - - - H T P Q M S Q E M A P H A V Y P N T T E E H G L L Y N M F N - A S V P E A S - - N E D -
 
AT4G13480.1     A I W D G F W N M D V V N G H G G N L G V V A A T A A C G P R K P Y F H N L V I P F C
pt035652_POPTR_    I L W D G L W N L D D V H - - - G N F G V - - - - - A C A T S R A S M H N L V S P F C
 
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