fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041020 not found in 264aa AT3G24310.1 not_not 0.577777777 III
Pt003856 not found in 218aa AT3G30210.1 not_not 0.446666666 III
Pt018250 not found in 212aa AT3G30210.1 not_not 0.44 III
Pt020408 not found in 209aa AT3G30210.1 not_not 0.424444444 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13480.1     --------------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKS
pt020408_POPTR_ ---------MGRG-IAEQGWRKGPWTPEEDKLLSEYVSSNGEGRWSSVSRCSVLNFGGKS
pt041020_POPTR_ MSWGVMAGQLAWGGLIEEGWRKGPWTAEEDRLLIEYVRLHGDGRWSSVARLAGLKRNGKS
pt003856_POPTR_ -----MVARMGWG-IPEKGWRKGPWTPEEDKLLIEYVSLHGEGRWSSVSRCPGLNRSGKS
pt018250_POPTR_ -----MVAMMGRG-IAEQGWRKGPWTPEEDKLLSEYVSLNGEGRWSSVSRCSGLNRSGKS
                              : *: *******.***:** ***  :*:***.**:: . *: .***

AT4G13480.1     CRLRWVNYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHF
pt020408_POPTR_ CRLRWVNYLRPGLKRGQITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHF
pt041020_POPTR_ CRLRWVNYLRPDLKRGQITPHEESIIVELHARWGNRWSTIARSLPGRTDNEIKNYWRTHF
pt003856_POPTR_ CRLRWVNYLRPGLKRGQITPQEEGIIIELHALLGNKWSTIARYLPGRTDNEIKNYWRTHS
pt018250_POPTR_ CRLRWVNYLRPGLKRGQITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHF
                ***********.********:**.**:****  **:****** **************** 

AT4G13480.1     KKKAKPTTNNAEKIKSRLLKRQHFKE-----QREIELQQEQQLFQFDQLGMKKIISLLEE
pt020408_POPTR_ KKKDKSSQKQ-EKRKALILEQEVQH-----------HQQQQQQLEAGEMKMVNTID----
pt041020_POPTR_ KKKAKLSPDNSDKARTRHLKRQQFQQQQQQLQRQQQQTQHQQPLQINQLDMRKIVSLLDE
pt003856_POPTR_ KKKEKSSQKQLEKRKAQILKQEEEHQQ----HLQQQQQQQQQQLEAGDMNMVNTIA----
pt018250_POPTR_ KKKDKSSQKQ-EKRNALILKQEVQ-------------QQQQQQLEAGEMKMVNTID----
                *** * : .: :* .:  *:::                *.** :: .:: * : :     

AT4G13480.1     NNSSSSSDGGGDVFYYPDQITHSSKPFGYNSNSLEEQ-----LQGRFSPVN--IPDANTM
pt020408_POPTR_ -----------------HVKMHEAQEMYFMYHNLEDQCSPVMTQDVASWADFVVEDYY--
pt041020_POPTR_ NEDKAPCT---------PQMRQEMAPHAIYPNTIEEHV---LLYNMFNVNNASVPEAS--
pt003856_POPTR_ -----------------HEKMHGAPEM--MYPTVEDQCLPVMSQDVVSWADSVVEDYY--
pt018250_POPTR_ -----------------HVKMHEAQEMYFMYHNLEDQCSPVMTQDAASWADFVVEDYY--
                                     :          .:*::       .  .  :  : :    

AT4G13480.1     NEDNAIWDGFWNMDVVNGHGGNLGVVAATAACGPRKPYFHNLVIPFC
pt020408_POPTR_ ----GLWGGLWNLDD---HPQ--------------------------
pt041020_POPTR_ NED-ILWDGLWNLDDLH---GNLGV-----ACATSKASMQNLVAPFC
pt003856_POPTR_ ----RLWGGFWNLDD---HP---------------------------
pt018250_POPTR_ ----GLWGGLWNLDD---HPQD-------------------------
                     :*.*:**:*
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K S
pt020408_POPTR_    - - - - - - - - - M G R G - I A E Q G W R K G P W T P E E D K L L S E Y V S S N G E G R W S S V S R C S V L N F G G K S
pt041020_POPTR_    M S W G V M A G Q L A W G G L I E E G W R K G P W T A E E D R L L I E Y V R L H G D G R W S S V A R L A G L K R N G K S
pt003856_POPTR_    - - - - - M V A R M G W G - I P E K G W R K G P W T P E E D K L L I E Y V S L H G E G R W S S V S R C P G L N R S G K S
pt018250_POPTR_    - - - - - M V A M M G R G - I A E Q G W R K G P W T P E E D K L L S E Y V S L N G E G R W S S V S R C S G L N R S G K S
 
AT4G13480.1     C R L R W V N Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F
pt020408_POPTR_    C R L R W V N Y L R P G L K R G Q I T P Q E E G I I I E L H A L W G N K W S T I A R Y L P G R T D N E I K N Y W R T H F
pt041020_POPTR_    C R L R W V N Y L R P D L K R G Q I T P H E E S I I V E L H A R W G N R W S T I A R S L P G R T D N E I K N Y W R T H F
pt003856_POPTR_    C R L R W V N Y L R P G L K R G Q I T P Q E E G I I I E L H A L L G N K W S T I A R Y L P G R T D N E I K N Y W R T H S
pt018250_POPTR_    C R L R W V N Y L R P G L K R G Q I T P Q E E G I I I E L H A L W G N K W S T I A R Y L P G R T D N E I K N Y W R T H F
 
AT4G13480.1     K K K A K P T T N N A E K I K S R L L K R Q H F K E - - - - - Q R E I E L Q Q E Q Q L F Q F D Q L G M K K I I S L L E E
pt020408_POPTR_    K K K D K S S Q K Q - E K R K A L I L E Q E V Q H - - - - - - - - - - - H Q Q Q Q Q Q L E A G E M K M V N T I D - - - -
pt041020_POPTR_    K K K A K L S P D N S D K A R T R H L K R Q Q F Q Q Q Q Q Q L Q R Q Q Q Q T Q H Q Q P L Q I N Q L D M R K I V S L L D E
pt003856_POPTR_    K K K E K S S Q K Q L E K R K A Q I L K Q E E E H Q Q - - - - H L Q Q Q Q Q Q Q Q Q Q L E A G D M N M V N T I A - - - -
pt018250_POPTR_    K K K D K S S Q K Q - E K R N A L I L K Q E V Q - - - - - - - - - - - - - Q Q Q Q Q Q L E A G E M K M V N T I D - - - -
 
AT4G13480.1     N N S S S S S D G G G D V F Y Y P D Q I T H S S K P F G Y N S N S L E E Q - - - - - L Q G R F S P V N - - I P D A N T M
pt020408_POPTR_    - - - - - - - - - - - - - - - - - H V K M H E A Q E M Y F M Y H N L E D Q C S P V M T Q D V A S W A D F V V E D Y Y - -
pt041020_POPTR_    N E D K A P C T - - - - - - - - - P Q M R Q E M A P H A I Y P N T I E E H V - - - L L Y N M F N V N N A S V P E A S - -
pt003856_POPTR_    - - - - - - - - - - - - - - - - - H E K M H G A P E M - - M Y P T V E D Q C L P V M S Q D V V S W A D S V V E D Y Y - -
pt018250_POPTR_    - - - - - - - - - - - - - - - - - H V K M H E A Q E M Y F M Y H N L E D Q C S P V M T Q D A A S W A D F V V E D Y Y - -
 
AT4G13480.1     N E D N A I W D G F W N M D V V N G H G G N L G V V A A T A A C G P R K P Y F H N L V I P F C
pt020408_POPTR_    - - - - G L W G G L W N L D D - - - H P Q - - - - - - - - - - - - - - - - - - - - - - - - - -
pt041020_POPTR_    N E D - I L W D G L W N L D D L H - - - G N L G V - - - - - A C A T S K A S M Q N L V A P F C
pt003856_POPTR_    - - - - R L W G G F W N L D D - - - H P - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt018250_POPTR_    - - - - G L W G G L W N L D D - - - H P Q D - - - - - - - - - - - - - - - - - - - - - - - - -
 
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