fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008808 not found in 289aa AT3G24310.1 not_not 0.477777777 III
Os011162 not found in 247aa AT3G24310.1 not_not 0.431111111 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13480.1     ---------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRW
Os008808_Os02t0 MEGQQFAWGREEGGWRKGPWTAQEDKLLVEYVRQHGEGRWNSVAKITGLKRSGKSCRLRW
Os011162_Os03t0 MDEIRSL--MLQQGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRW
                           :  ******** **:** ***: **** ****:*::**:*.********

AT4G13480.1     VNYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAK
Os008808_Os02t0 VNYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRTHF-KKGK
Os011162_Os03t0 VNYLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHF-KKAR
                ***********:***.**::**:***  *****:***.***************** **.:

AT4G13480.1     PTTNNAEKIKSRLLKRQHFKEQRE--------IELQQEQQLFQF---DQLGM-KKIISLL
Os008808_Os02t0 P-SKNIERARARFLKQRR---------------EMQQQSQLMQTGQQQQLGQDDDATSAV
Os011162_Os03t0 P----SRRARAQLLHQYQLQQQQQHRQYLHSLNLLQQQQQQLQQQQQQQ----QQQMMLL
                *     .: ::::*:: :                :**:.* :*    :*    ..    :

AT4G13480.1     EENN---------SSSSSDGGGDV------------FYYPDQITHSSKPFGYN-------
Os008808_Os02t0 VDDNLAEVAPPAATSLTHDGELQIMQEMAPDMDDLLYYHPGDMS----PYSYDDLLGSGG
Os011162_Os03t0 QEQE--QQSP---------------QEEAAD-DSMVMMMMNDLQ-------------SKE
                 :::                                    .::                 

AT4G13480.1     ----------------SNSLEEQLQGRFSPVNIPDANTM-NEDNAIWDGFWNMDVVNGHG
Os008808_Os02t0 GECGAVAASAGAAASTSEGSSEELDG----------------GAATWGSLWNLDDVV-HD
Os011162_Os03t0 RCCTAVSV------------------------VPDDCVLPADDDAIWDSLWRLVD---GD
                                                          . * *..:*.:      .

AT4G13480.1     GNLGVVAATAACGPRKPYFHNLVIPFC
Os008808_Os02t0 MMIDCAAGAGCCWGSFPPLQDKGLAFY
Os011162_Os03t0 GSCGEGSSGGEYWATS-----------
                   .  :. .
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K S C R L R W
Os008808_Os02t0    M E G Q Q F A W G R E E G G W R K G P W T A Q E D K L L V E Y V R Q H G E G R W N S V A K I T G L K R S G K S C R L R W
Os011162_Os03t0    M D E I R S L - - M L Q Q G W R K G P W T A L E D R L L T E Y V Q Q H G E G S W N S V A K L T G L R R S G K S C R L R W
 
AT4G13480.1     V N Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F K K K A K
Os008808_Os02t0    V N Y L R P D L K R G K I T P Q E E S V I L E L H A L W G N R W S T I A R S L P G R T D N E I K N Y W R T H F - K K G K
Os011162_Os03t0    V N Y L R P D L K R G K I T P D E E T V I L Q L H A M L G N R W S A I A R C L P G R T D N E I K N Y W R T H F - K K A R
 
AT4G13480.1     P T T N N A E K I K S R L L K R Q H F K E Q R E - - - - - - - - I E L Q Q E Q Q L F Q F - - - D Q L G M - K K I I S L L
Os008808_Os02t0    P - S K N I E R A R A R F L K Q R R - - - - - - - - - - - - - - - E M Q Q Q S Q L M Q T G Q Q Q Q L G Q D D D A T S A V
Os011162_Os03t0    P - - - - S R R A R A Q L L H Q Y Q L Q Q Q Q Q H R Q Y L H S L N L L Q Q Q Q Q Q L Q Q Q Q Q Q Q - - - - Q Q Q M M L L
 
AT4G13480.1     E E N N - - - - - - - - - S S S S S D G G G D V - - - - - - - - - - - - F Y Y P D Q I T H S S K P F G Y N - - - - - - -
Os008808_Os02t0    V D D N L A E V A P P A A T S L T H D G E L Q I M Q E M A P D M D D L L Y Y H P G D M S - - - - P Y S Y D D L L G S G G
Os011162_Os03t0    Q E Q E - - Q Q S P - - - - - - - - - - - - - - - Q E E A A D - D S M V M M M M N D L Q - - - - - - - - - - - - - S K E
 
AT4G13480.1     - - - - - - - - - - - - - - - - S N S L E E Q L Q G R F S P V N I P D A N T M - N E D N A I W D G F W N M D V V N G H G
Os008808_Os02t0    G E C G A V A A S A G A A A S T S E G S S E E L D G - - - - - - - - - - - - - - - - G A A T W G S L W N L D D V V - H D
Os011162_Os03t0    R C C T A V S V - - - - - - - - - - - - - - - - - - - - - - - - V P D D C V L P A D D D A I W D S L W R L V D - - - G D
 
AT4G13480.1     G N L G V V A A T A A C G P R K P Y F H N L V I P F C
Os008808_Os02t0    M M I D C A A G A G C C W G S F P P L Q D K G L A F Y
Os011162_Os03t0    G S C G E G S S G G E Y W A T S - - - - - - - - - - -
 
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