fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002608 not found in 253aa AT3G24310.1 not_not 0.433333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13480.1     -------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVN
Sb002608_Sorbi1 MDAISSLMLQEGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRWVN
                       *::* ******** ***** ***: **** ****:**:**:*.**********

AT4G13480.1     YLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPT
Sb002608_Sorbi1 YLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHF-KKARPS
                *********:***.**::**:***  *****:***.***************** ***:*:

AT4G13480.1     TNNAEKIKSRLLKRQHFKEQRE-------IELQQEQQLFQFDQLGMKKIISLLEENNSSS
Sb002608_Sorbi1 ----RRARAQLLHQYQLQQQEQRRQYLQSLQLLQQQQQQQQEM--------LLQQQNQQQ
                    .: :::**:: ::::*.:       ::* *:**  * :         **:::*...

AT4G13480.1     SSDGGGDVFYYPDQITHSSKPFGYNS------NSLEEQLQGRFSPVN------IPD---A
Sb002608_Sorbi1 -------LVVKQQQLEQQSPPESDHQAVMAMMDSLQSTAECYCSPVSPMMSVPVPEQCCA
                       :.   :*: :.* * . :.      :**:.  :   ***.      :*:   *

AT4G13480.1     NTMNEDNAIWDGFWNMDVVNGHGGNLGVVAATAACGPRK-----PYFHNLVIPFC
Sb002608_Sorbi1 LPADDDAMLWDSLWRL--VDGEG-----------CGDGDGSSGGEY---------
                 . ::*  :**.:*.:  *:*.*           **  .      *
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K S C R L R W V N
Sb002608_Sorbi1    M D A I S S L M L Q E G W R K G P W T A L E D R L L T E Y V Q Q H G E G S W N S V A K L T G L R R S G K S C R L R W V N
 
AT4G13480.1     Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F K K K A K P T
Sb002608_Sorbi1    Y L R P D L K R G K I T P D E E T V I L Q L H A M L G N R W S A I A R C L P G R T D N E I K N Y W R T H F - K K A R P S
 
AT4G13480.1     T N N A E K I K S R L L K R Q H F K E Q R E - - - - - - - I E L Q Q E Q Q L F Q F D Q L G M K K I I S L L E E N N S S S
Sb002608_Sorbi1    - - - - R R A R A Q L L H Q Y Q L Q Q Q E Q R R Q Y L Q S L Q L L Q Q Q Q Q Q Q Q E M - - - - - - - - L L Q Q Q N Q Q Q
 
AT4G13480.1     S S D G G G D V F Y Y P D Q I T H S S K P F G Y N S - - - - - - N S L E E Q L Q G R F S P V N - - - - - - I P D - - - A
Sb002608_Sorbi1    - - - - - - - L V V K Q Q Q L E Q Q S P P E S D H Q A V M A M M D S L Q S T A E C Y C S P V S P M M S V P V P E Q C C A
 
AT4G13480.1     N T M N E D N A I W D G F W N M D V V N G H G G N L G V V A A T A A C G P R K - - - - - P Y F H N L V I P F C
Sb002608_Sorbi1    L P A D D D A M L W D S L W R L - - V D G E G - - - - - - - - - - - C G D G D G S S G G E Y - - - - - - - - -
 
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