fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010738 not found in 288aa AT4G13480.1 1st_1st 0.48 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13480.1     --------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWV
Sb010738_Sorbi1 MEGQFGWGREEGGWRKGPWTAQEDKLLVEYVRQHGEGRWNSVAKLTGLKRSGKSCRLRWV
                          *  ********:**:**:**** *********:**:****.*********

AT4G13480.1     NYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKP
Sb010738_Sorbi1 NYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRTHF-KKGKP
                **********:***:***:****** **************************** **.**

AT4G13480.1     TTNNAEKIKSRLLKRQH-------------------------------------------
Sb010738_Sorbi1 -SKNIERARARFLKQRREMQSQLLLQGQDHHQQKEKQPDHHHDDDDDDDKDTSRDREAAA
                 ::* *: ::*:**:::                                           

AT4G13480.1     -----FKEQREIELQQEQQ-----LFQFDQLGMKKIISLLEENNSSSSS---DGGGDVFY
Sb010738_Sorbi1 PAAVSLAQQNEEDLRMLQQDMDDLLFQFCPMA-----------SCTSSSCLLPGGGSC--
                     : :*.* :*:  **     ****  :.           ..:***    ***.   

AT4G13480.1     YPDQITHSSKPFGYNSNSLEEQLQGRFSPVNIPDANTMNEDNAIWDGFWNM-DVVNGHGG
Sb010738_Sorbi1 -ASVVSASASEEG---SSGDHQLDG---------GATWG-----WGSLWNLDDVVDDVDG
                 .. :: *:.  *   .* :.**:*         . * .     *..:**: ***:. .*

AT4G13480.1     NLGVVAATAACG---PRKPYFHNLVIPFC
Sb010738_Sorbi1 --------GACGWDDSSFPLLQDQGLAFY
                        .***   .  * :::  :.*
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K S C R L R W V
Sb010738_Sorbi1    M E G Q F G W G R E E G G W R K G P W T A Q E D K L L V E Y V R Q H G E G R W N S V A K L T G L K R S G K S C R L R W V
 
AT4G13480.1     N Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F K K K A K P
Sb010738_Sorbi1    N Y L R P D L K R G K I T P Q E E S V I L E L H A L W G N R W S T I A R S L P G R T D N E I K N Y W R T H F - K K G K P
 
AT4G13480.1     T T N N A E K I K S R L L K R Q H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010738_Sorbi1    - S K N I E R A R A R F L K Q R R E M Q S Q L L L Q G Q D H H Q Q K E K Q P D H H H D D D D D D D K D T S R D R E A A A
 
AT4G13480.1     - - - - - F K E Q R E I E L Q Q E Q Q - - - - - L F Q F D Q L G M K K I I S L L E E N N S S S S S - - - D G G G D V F Y
Sb010738_Sorbi1    P A A V S L A Q Q N E E D L R M L Q Q D M D D L L F Q F C P M A - - - - - - - - - - - S C T S S S C L L P G G G S C - -
 
AT4G13480.1     Y P D Q I T H S S K P F G Y N S N S L E E Q L Q G R F S P V N I P D A N T M N E D N A I W D G F W N M - D V V N G H G G
Sb010738_Sorbi1    - A S V V S A S A S E E G - - - S S G D H Q L D G - - - - - - - - - G A T W G - - - - - W G S L W N L D D V V D D V D G
 
AT4G13480.1     N L G V V A A T A A C G - - - P R K P Y F H N L V I P F C
Sb010738_Sorbi1    - - - - - - - - G A C G W D D S S F P L L Q D Q G L A F Y
 
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