fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010738 not found in 288aa AT4G13480.1 1st_1st 0.48 Ia
Sb002608 not found in 253aa AT3G24310.1 not_not 0.433333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13480.1     --------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWV
Sb002608_Sorbi1 MDAISSL-MLQEGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRWV
Sb010738_Sorbi1 MEGQFGWGREEGGWRKGPWTAQEDKLLVEYVRQHGEGRWNSVAKLTGLKRSGKSCRLRWV
                          :  ******** **:** ***: **** ****:**:**:*.*********

AT4G13480.1     NYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKP
Sb002608_Sorbi1 NYLRPDLKRGKITPDEETVILQLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHF-KKARP
Sb010738_Sorbi1 NYLRPDLKRGKITPQEESVILELHALWGNRWSTIARSLPGRTDNEIKNYWRTHF-KKGKP
                **********:***.**::**:***  *****:***.***************** **.:*

AT4G13480.1     TTNNAEKIKSRLL---------KRQH----------------------------------
Sb002608_Sorbi1 ----SRRARAQLLHQYQLQQQEQRRQYLQSLQLLQQQQQQQQE-----------------
Sb010738_Sorbi1 -SKNIERARARFL---------KQRREMQSQLLLQGQDHHQQKEKQPDHHHDDDDDDDKD
                     .: ::::*         ::::                                  

AT4G13480.1     --------------FKEQREIELQQEQQ-----LFQFDQLGM--KKIISLLEENNSSSSS
Sb002608_Sorbi1 ------------MLLQQQNQQQLVVKQQQ----LEQQSPPESDHQAVMAMMDSLQSTAEC
Sb010738_Sorbi1 TSRDREAAAPAAVSLAQQNEEDLRMLQQDMDDLLFQFCPMA-------------SCTSSS
                              : :*.: :*   **     * *                  ..::..

AT4G13480.1     ---DGGGDVFYYPDQITHSSKPFGYNSNSLEEQLQGRFSPVNIPD---ANTMNEDNAIWD
Sb002608_Sorbi1 -----------YCSPVSPMMS-------------------VPVPEQCCALPADDDAMLWD
Sb010738_Sorbi1 CLLPGGGSC---ASVVSASASEEG---SSGDHQLDG------------GATWG-----WG
                             . ::   .                           . . .     *.

AT4G13480.1     GFWNM-DVVNGHGGNLGVVAATAACG------PRKPYFHNLVIPFC
Sb002608_Sorbi1 SLWRL------VDG--------EGCG-DGDGSSGGEY---------
Sb010738_Sorbi1 SLWNLDDVVDDVDG--------GACGWD---DSSFPLLQDQGLAFY
                .:*.:       .*         .**      .
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K S C R L R W V
Sb002608_Sorbi1    M D A I S S L - M L Q E G W R K G P W T A L E D R L L T E Y V Q Q H G E G S W N S V A K L T G L R R S G K S C R L R W V
Sb010738_Sorbi1    M E G Q F G W G R E E G G W R K G P W T A Q E D K L L V E Y V R Q H G E G R W N S V A K L T G L K R S G K S C R L R W V
 
AT4G13480.1     N Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H F K K K A K P
Sb002608_Sorbi1    N Y L R P D L K R G K I T P D E E T V I L Q L H A M L G N R W S A I A R C L P G R T D N E I K N Y W R T H F - K K A R P
Sb010738_Sorbi1    N Y L R P D L K R G K I T P Q E E S V I L E L H A L W G N R W S T I A R S L P G R T D N E I K N Y W R T H F - K K G K P
 
AT4G13480.1     T T N N A E K I K S R L L - - - - - - - - - K R Q H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb002608_Sorbi1    - - - - S R R A R A Q L L H Q Y Q L Q Q Q E Q R R Q Y L Q S L Q L L Q Q Q Q Q Q Q Q E - - - - - - - - - - - - - - - - -
Sb010738_Sorbi1    - S K N I E R A R A R F L - - - - - - - - - K Q R R E M Q S Q L L L Q G Q D H H Q Q K E K Q P D H H H D D D D D D D K D
 
AT4G13480.1     - - - - - - - - - - - - - - F K E Q R E I E L Q Q E Q Q - - - - - L F Q F D Q L G M - - K K I I S L L E E N N S S S S S
Sb002608_Sorbi1    - - - - - - - - - - - - M L L Q Q Q N Q Q Q L V V K Q Q Q - - - - L E Q Q S P P E S D H Q A V M A M M D S L Q S T A E C
Sb010738_Sorbi1    T S R D R E A A A P A A V S L A Q Q N E E D L R M L Q Q D M D D L L F Q F C P M A - - - - - - - - - - - - - S C T S S S
 
AT4G13480.1     - - - D G G G D V F Y Y P D Q I T H S S K P F G Y N S N S L E E Q L Q G R F S P V N I P D - - - A N T M N E D N A I W D
Sb002608_Sorbi1    - - - - - - - - - - - Y C S P V S P M M S - - - - - - - - - - - - - - - - - - - V P V P E Q C C A L P A D D D A M L W D
Sb010738_Sorbi1    C L L P G G G S C - - - A S V V S A S A S E E G - - - S S G D H Q L D G - - - - - - - - - - - - G A T W G - - - - - W G
 
AT4G13480.1     G F W N M - D V V N G H G G N L G V V A A T A A C G - - - - - - P R K P Y F H N L V I P F C
Sb002608_Sorbi1    S L W R L - - - - - - V D G - - - - - - - - E G C G - D G D G S S G G E Y - - - - - - - - -
Sb010738_Sorbi1    S L W N L D D V V D D V D G - - - - - - - - G A C G W D - - - D S S F P L L Q D Q G L A F Y
 
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