fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047286 not found in 265aa AT3G24310.1 1st_not 0.544444444 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13480.1     ---------------MVEEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGK
gm047286_Glyma1 MYWGEVMAGHVGRGVLEEEVWRKGPWTAEEDRLLVEYVRLHCEGRWNSVARLAGLKRNGK
                               : *****************:****:* *******::*********

AT4G13480.1     SCRLRWVNYLRPDLKRGQITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTH
gm047286_Glyma1 SCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTH
                *********************:**********:***************************

AT4G13480.1     FKKKAKPTTNNAEKIKSRLLKRQHFKEQREIE--------LQQEQQLFQFDQLGMKKIIS
gm047286_Glyma1 FKKKAKSPSDAAEKARNRLMRKQQFHQQQQQQQQLQQQHRAQQQQMQFNFD---MKGIMA
                ******..:: *** :.**:::*:*::*:: :         **:*  *:**   ** *::

AT4G13480.1     LLEENNSSSSSDGGGDVFYYPDQITHSSKPFGYNSNSLEEQ------LQGRFSPVNIPDA
gm047286_Glyma1 MLED-----------DIHRTPYKSQSRQEMINMHQNTTEEQGYLYSMLNDNSSASSAPET
                :**:           *:.  * :    .: :. :.*: ***      *:.. *. . *::

AT4G13480.1     NTMNEDNAIWDGFWNMDVVNGHGGNLGVVAATAACGPRKPYFHNLVIPFC
gm047286_Glyma1 SA---EEVLWDGLWNIDDVH---GNFSVASAASRFG-----LYNLVAPFC
                .:   ::.:***:**:* *:   **:.*.:*::  *     ::*** ***
BoxShade v3.31 C (beta, 970507) Output
AT4G13480.1     - - - - - - - - - - - - - - - M V E E V W R K G P W T A E E D R L L I E Y V R V H G E G R W N S V S K L A G L K R N G K
gm047286_Glyma1    M Y W G E V M A G H V G R G V L E E E V W R K G P W T A E E D R L L V E Y V R L H C E G R W N S V A R L A G L K R N G K
 
AT4G13480.1     S C R L R W V N Y L R P D L K R G Q I T P H E E S I I L E L H A K W G N R W S T I A R S L P G R T D N E I K N Y W R T H
gm047286_Glyma1    S C R L R W V N Y L R P D L K R G Q I T P Q E E S I I L E L H A R W G N R W S T I A R S L P G R T D N E I K N Y W R T H
 
AT4G13480.1     F K K K A K P T T N N A E K I K S R L L K R Q H F K E Q R E I E - - - - - - - - L Q Q E Q Q L F Q F D Q L G M K K I I S
gm047286_Glyma1    F K K K A K S P S D A A E K A R N R L M R K Q Q F H Q Q Q Q Q Q Q Q L Q Q Q H R A Q Q Q Q M Q F N F D - - - M K G I M A
 
AT4G13480.1     L L E E N N S S S S S D G G G D V F Y Y P D Q I T H S S K P F G Y N S N S L E E Q - - - - - - L Q G R F S P V N I P D A
gm047286_Glyma1    M L E D - - - - - - - - - - - D I H R T P Y K S Q S R Q E M I N M H Q N T T E E Q G Y L Y S M L N D N S S A S S A P E T
 
AT4G13480.1     N T M N E D N A I W D G F W N M D V V N G H G G N L G V V A A T A A C G P R K P Y F H N L V I P F C
gm047286_Glyma1    S A - - - E E V L W D G L W N I D D V H - - - G N F S V A S A A S R F G - - - - - L Y N L V A P F C
 
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