fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028182 not found in 387aa AT4G13620.1 1st_1st 0.278666666 Ib
Pt003421 not found in 456aa AT4G13620.1 1st_1st 0.333333333 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13620.1     MITPIHTQHSLILVYINIYSPPILSKLRTGFILWTNTQKTNKKRNMEDQFPKIETSFMHD
gm028182_Glyma1 ------------------------------------------------------------
pt003421_POPTR_ ---------------------------------------------MEDQFPKIET-FMHK
                                                                            

AT4G13620.1     KLLSSGIYGFLSSSTPPQLLGVPIFLE----------------GMKSPLLPASSTPSYFV
gm028182_Glyma1 ------------MATGSKFLDNAIIRGHSHFLTASNHLHVLKSGANSSI--ASSPENLFS
pt003421_POPTR_ ELVAA-YCSFHGMATGSKYFGDPTIWG--ALSGATCRVEDGNSGMKSPS--QSSSERLFS
                             :* .: :. . :                  * :*.    **.   * 

AT4G13620.1     SP------------------------------HDHEL--------TSSIHPSPVA-----
gm028182_Glyma1 CSNPTSMKEEAPLAT-WISHIPAKFNVHQDIKNGKEK------NQSNSIFPASDT----K
pt003421_POPTR_ SSESSSSADDQVSGTDLIGNIPG-FGKQDVVKQDHESCFMSGMNSINALGANSISDQTIK
                ..                              :.:*          .:: . . :     

AT4G13620.1     --SVPWNFLESFP----QSQHPDHHP----------SKPPNLTLFLKEP---KLLELSQS
gm028182_Glyma1 NSSIPLNLLETLPPLTIAPCFDE--PVTSLASSSAIPKFPNLTLFLQEP---SMVYSSIS
pt003421_POPTR_ ESSIPVNFLEPFPTLKNQAQVPE--P----PSPSSLSKSPNLTLFLQEPAAASLLHPSKR
                  *:* *:**.:*     .   :  *          .* *******:**   .::  *  

AT4G13620.1     ESNMS-------PYHKYIPNSFY--------QSDQNRNEWVEINKTLTNYPSKGFGNYWL
gm028182_Glyma1 SSNIKGGE-----VMSATSDPSYHVSQFVQNQHQAGSGDAHKMNKSLSNSQSKSFDENWL
pt003421_POPTR_ VLDPPGKDQRCEPAMSLFPNTSFSMPQLGQ-VHCQPSNEWLKINQTLANYSTKGFNDYWL
                  :            .  .:. :              .:  ::*::*:*  :*.*.: **

AT4G13620.1     STTKTQPMKSKTRKVVQ----------TTTPTKLYRGVRQRHWGKWVAEIRLPRNRTRVW
gm028182_Glyma1 SATRTQPMKNGGR------------------GKLFKGVRQRHWGKWVAEIRLPRNRTRVW
pt003421_POPTR_ STTKTQPMKYSGRKLQNHHQKPSFSSASTSPGKLFRGVRQRHWGKWVAEIRLPRNRTRVW
                *:*:*****   *                   **::************************

AT4G13620.1     LGTFETAEQAAMAYDTAAYILRGEFAHLNFPDLKHQLKSGSLRCMIASLLESKIQQISSS
gm028182_Glyma1 LGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISKG
pt003421_POPTR_ LGTFDTAEDAAIAYDTAAYMLRGDYAHLNFPDLKHQLKSSSLNRTITALLEAKLQAISSQ
                ****:***:**:*******:***::*:******** :::.**.   ::*:*:*:* **. 

AT4G13620.1     QVS-----NSPSPPPPKVGTPEQ--------------------KNHHMKM--ESGEDVMM
gm028182_Glyma1 GSS----HRKPTDSPP--GSSNK---HNDENGKLKSISG----KDSSIRL----GAEITE
pt003421_POPTR_ GNNISGQNKHISDPPP--PSPSKINVHATDATKLKGLSQNTTRKEWQFELRGKSGGEVIE
                  .     .  : .**   :..:                    *:  :.:    * ::  

AT4G13620.1     KKQKSHKEVMEGDGVQLSRMPSLDMDLIWDALSFPHSS
gm028182_Glyma1 RSKSTHHETSDVEGVQLSRMPSLDMDIIWDELFVSNS-
pt003421_POPTR_ NKKGQEVVASDIDAIQLSRMPSLDMDMIWDALLVSDS-
                ..:  .  . : :.:***********:*** * ...*
BoxShade v3.31 C (beta, 970507) Output
AT4G13620.1     M I T P I H T Q H S L I L V Y I N I Y S P P I L S K L R T G F I L W T N T Q K T N K K R N M E D Q F P K I E T S F M H D
gm028182_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt003421_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E D Q F P K I E T - F M H K
 
AT4G13620.1     K L L S S G I Y G F L S S S T P P Q L L G V P I F L E - - - - - - - - - - - - - - - - G M K S P L L P A S S T P S Y F V
gm028182_Glyma1    - - - - - - - - - - - - M A T G S K F L D N A I I R G H S H F L T A S N H L H V L K S G A N S S I - - A S S P E N L F S
pt003421_POPTR_    E L V A A - Y C S F H G M A T G S K Y F G D P T I W G - - A L S G A T C R V E D G N S G M K S P S - - Q S S S E R L F S
 
AT4G13620.1     S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H D H E L - - - - - - - - T S S I H P S P V A - - - - -
gm028182_Glyma1    C S N P T S M K E E A P L A T - W I S H I P A K F N V H Q D I K N G K E K - - - - - - N Q S N S I F P A S D T - - - - K
pt003421_POPTR_    S S E S S S S A D D Q V S G T D L I G N I P G - F G K Q D V V K Q D H E S C F M S G M N S I N A L G A N S I S D Q T I K
 
AT4G13620.1     - - S V P W N F L E S F P - - - - Q S Q H P D H H P - - - - - - - - - - S K P P N L T L F L K E P - - - K L L E L S Q S
gm028182_Glyma1    N S S I P L N L L E T L P P L T I A P C F D E - - P V T S L A S S S A I P K F P N L T L F L Q E P - - - S M V Y S S I S
pt003421_POPTR_    E S S I P V N F L E P F P T L K N Q A Q V P E - - P - - - - P S P S S L S K S P N L T L F L Q E P A A A S L L H P S K R
 
AT4G13620.1     E S N M S - - - - - - - P Y H K Y I P N S F Y - - - - - - - - Q S D Q N R N E W V E I N K T L T N Y P S K G F G N Y W L
gm028182_Glyma1    S S N I K G G E - - - - - V M S A T S D P S Y H V S Q F V Q N Q H Q A G S G D A H K M N K S L S N S Q S K S F D E N W L
pt003421_POPTR_    V L D P P G K D Q R C E P A M S L F P N T S F S M P Q L G Q - V H C Q P S N E W L K I N Q T L A N Y S T K G F N D Y W L
 
AT4G13620.1     S T T K T Q P M K S K T R K V V Q - - - - - - - - - - T T T P T K L Y R G V R Q R H W G K W V A E I R L P R N R T R V W
gm028182_Glyma1    S A T R T Q P M K N G G R - - - - - - - - - - - - - - - - - - G K L F K G V R Q R H W G K W V A E I R L P R N R T R V W
pt003421_POPTR_    S T T K T Q P M K Y S G R K L Q N H H Q K P S F S S A S T S P G K L F R G V R Q R H W G K W V A E I R L P R N R T R V W
 
AT4G13620.1     L G T F E T A E Q A A M A Y D T A A Y I L R G E F A H L N F P D L K H Q L K S G S L R C M I A S L L E S K I Q Q I S S S
gm028182_Glyma1    L G T F D T A E D A A I A Y D T A A Y I L R G E Y A Q L N F P D L K H V I Q A N S L N G T T A A L V E A K L Q A I S K G
pt003421_POPTR_    L G T F D T A E D A A I A Y D T A A Y M L R G D Y A H L N F P D L K H Q L K S S S L N R T I T A L L E A K L Q A I S S Q
 
AT4G13620.1     Q V S - - - - - N S P S P P P P K V G T P E Q - - - - - - - - - - - - - - - - - - - - K N H H M K M - - E S G E D V M M
gm028182_Glyma1    G S S - - - - H R K P T D S P P - - G S S N K - - - H N D E N G K L K S I S G - - - - K D S S I R L - - - - G A E I T E
pt003421_POPTR_    G N N I S G Q N K H I S D P P P - - P S P S K I N V H A T D A T K L K G L S Q N T T R K E W Q F E L R G K S G G E V I E
 
AT4G13620.1     K K Q K S H K E V M E G D G V Q L S R M P S L D M D L I W D A L S F P H S S
gm028182_Glyma1    R S K S T H H E T S D V E G V Q L S R M P S L D M D I I W D E L F V S N S -
pt003421_POPTR_    N K K G Q E V V A S D I D A I Q L S R M P S L D M D M I W D A L L V S D S -
 
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