fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028182 not found in 387aa AT4G13620.1 1st_1st 0.278666666 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13620.1     MITPIHTQHSLILVYINIYSPPILSKLRTGFILWTNTQKTNKKRNMEDQFPKIETSFM--
gm028182_Glyma1 --------------------------MATG------------SKFLDNAIIRGHSHFLTA
                                          : **            .: ::: : : .: *:  

AT4G13620.1     --HDKLLSSGIYGFLSSSTPPQLLGV--PIFLEGMKSPLLP-ASSTPSYFVSPHD-----
gm028182_Glyma1 SNHLHVLKSGANSSIASS-PENLFSCSNPTSMK-EEAPLATWISHIPAKFNVHQDIKNGK
                  * ::*.**  . ::** * :*:.   *  ::  ::** .  *  *: *   :*     

AT4G13620.1     -HELTSSIHP---SPVASVPWNFLESFP-----------------QSQHPDHHPSKPPNL
gm028182_Glyma1 EKNQSNSIFPASDTKNSSIPLNLLETLPPLTIAPCFDEPVTSLASSSAIP-----KFPNL
                 :: :.**.*   :  :*:* *:**::*                 .*  *     * ***

AT4G13620.1     TLFLKEPKLLELSQSESNMS-----------PYH--KYIPNSFYQSDQNRNEWVEINKTL
gm028182_Glyma1 TLFLQEPSMVYSSISSSNIKGGEVMSATSDPSYHVSQFVQN---QHQAGSGDAHKMNKSL
                ****:**.::  * *.**:.           .**  ::: *   * : . .:  ::**:*

AT4G13620.1     TNYPSKGFGNYWLSTTKTQPMKSKTRKVVQTTTPTKLYRGVRQRHWGKWVAEIRLPRNRT
gm028182_Glyma1 SNSQSKSFDENWLSATRTQPMKNGGRG--------KLFKGVRQRHWGKWVAEIRLPRNRT
                :*  **.*.: ***:*:*****.  *         **::*********************

AT4G13620.1     RVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPDLKHQLKSGSLRCMIASLLESKIQQI
gm028182_Glyma1 RVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAI
                *******:***:**:************:*:******** :::.**.   *:*:*:*:* *

AT4G13620.1     SSSQVSN-SPSPPPPKVGTPEQKNHH---MKMESGED--------VMMKKQKSHKEVMEG
gm028182_Glyma1 SKGGSSHRKPTDSPP--GSSNKHNDENGKLKSISGKDSSIRLGAEITERSKSTHHETSDV
                *..  *: .*: .**  *:.:::*..   :*  **:*        :  :.:.:*:*. : 

AT4G13620.1     DGVQLSRMPSLDMDLIWDALSFPHSS
gm028182_Glyma1 EGVQLSRMPSLDMDIIWDELFVSNS-
                :*************:*** * ..:*
BoxShade v3.31 C (beta, 970507) Output
AT4G13620.1     M I T P I H T Q H S L I L V Y I N I Y S P P I L S K L R T G F I L W T N T Q K T N K K R N M E D Q F P K I E T S F M - -
gm028182_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - M A T G - - - - - - - - - - - - S K F L D N A I I R G H S H F L T A
 
AT4G13620.1     - - H D K L L S S G I Y G F L S S S T P P Q L L G V - - P I F L E G M K S P L L P - A S S T P S Y F V S P H D - - - - -
gm028182_Glyma1    S N H L H V L K S G A N S S I A S S - P E N L F S C S N P T S M K - E E A P L A T W I S H I P A K F N V H Q D I K N G K
 
AT4G13620.1     - H E L T S S I H P - - - S P V A S V P W N F L E S F P - - - - - - - - - - - - - - - - - Q S Q H P D H H P S K P P N L
gm028182_Glyma1    E K N Q S N S I F P A S D T K N S S I P L N L L E T L P P L T I A P C F D E P V T S L A S S S A I P - - - - - K F P N L
 
AT4G13620.1     T L F L K E P K L L E L S Q S E S N M S - - - - - - - - - - - P Y H - - K Y I P N S F Y Q S D Q N R N E W V E I N K T L
gm028182_Glyma1    T L F L Q E P S M V Y S S I S S S N I K G G E V M S A T S D P S Y H V S Q F V Q N - - - Q H Q A G S G D A H K M N K S L
 
AT4G13620.1     T N Y P S K G F G N Y W L S T T K T Q P M K S K T R K V V Q T T T P T K L Y R G V R Q R H W G K W V A E I R L P R N R T
gm028182_Glyma1    S N S Q S K S F D E N W L S A T R T Q P M K N G G R G - - - - - - - - K L F K G V R Q R H W G K W V A E I R L P R N R T
 
AT4G13620.1     R V W L G T F E T A E Q A A M A Y D T A A Y I L R G E F A H L N F P D L K H Q L K S G S L R C M I A S L L E S K I Q Q I
gm028182_Glyma1    R V W L G T F D T A E D A A I A Y D T A A Y I L R G E Y A Q L N F P D L K H V I Q A N S L N G T T A A L V E A K L Q A I
 
AT4G13620.1     S S S Q V S N - S P S P P P P K V G T P E Q K N H H - - - M K M E S G E D - - - - - - - - V M M K K Q K S H K E V M E G
gm028182_Glyma1    S K G G S S H R K P T D S P P - - G S S N K H N D E N G K L K S I S G K D S S I R L G A E I T E R S K S T H H E T S D V
 
AT4G13620.1     D G V Q L S R M P S L D M D L I W D A L S F P H S S
gm028182_Glyma1    E G V Q L S R M P S L D M D I I W D E L F V S N S -
 
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