fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029592 not found in 303aa AT4G13640.1 1st_1st 0.635338345 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13640.1     MYSAIRSSLPLDGSLGDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQL
pt029592_POPTR_ MYSAIH-SLPLDGH-GDFQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQL
                *****: ******  **:.   ****** *****************:**********:**

AT4G13640.1     GGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDTGS
pt029592_POPTR_ GGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDAS-VAESQDTGS
                *******************************:***:****** *****.* *********

AT4G13640.1     SSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEK
pt029592_POPTR_ STSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEK
                *:::* *: **: *:.********.***********************************

AT4G13640.1     ACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVAIE
pt029592_POPTR_ ACKALNDQAVATAGLEAAREELSELAIK--VSNERAG-IAPLDTMKM--PSISELAAALE
                ****:::**** ****************  ::*   *  :.:** **  **:****.*:*

AT4G13640.1     HKN---------NCSAESSLTSSTVGSPVS-------AALMKKRQRGVFGNGDSVV----
pt029592_POPTR_ NKHASNVPARVGDCSVESCLTST--GSPVSPMGVGAQVASTKKRSRPVFGNGDSLPFDGN
                :*:         :**.**.***:  *****       .*  ***.* *******:     

AT4G13640.1     VGHDAGWVMPSSSIG
pt029592_POPTR_ IQQEVEWTMNNIV--
                : ::. *.* .
BoxShade v3.31 C (beta, 970507) Output
AT4G13640.1     M Y S A I R S S L P L D G S L G D Y S - - - D G T N L P I D A C L V L T T D P K P R L R W T S E L H E R F V D A V T Q L
pt029592_POPTR_    M Y S A I H - S L P L D G H - G D F Q A A L D G T N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V A Q L
 
AT4G13640.1     G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K F R L G R Q S C K E S I D N S K D V S C V A E S Q D T G S
pt029592_POPTR_    G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D A S - V A E S Q D T G S
 
AT4G13640.1     S S T S S L R L A A Q E Q N E S Y Q V T E A L R A Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S I L E K
pt029592_POPTR_    S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S I L E K
 
AT4G13640.1     A C K A I E E Q A V A F A G L E A A R E E L S E L A I K A S I T N G C Q G T T S T F D T T K M M I P S L S E L A V A I E
pt029592_POPTR_    A C K A L N D Q A V A T A G L E A A R E E L S E L A I K - - V S N E R A G - I A P L D T M K M - - P S I S E L A A A L E
 
AT4G13640.1     H K N - - - - - - - - - N C S A E S S L T S S T V G S P V S - - - - - - - A A L M K K R Q R G V F G N G D S V V - - - -
pt029592_POPTR_    N K H A S N V P A R V G D C S V E S C L T S T - - G S P V S P M G V G A Q V A S T K K R S R P V F G N G D S L P F D G N
 
AT4G13640.1     V G H D A G W V M P S S S I G
pt029592_POPTR_    I Q Q E V E W T M N N I V - -
 
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