fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029592 not found in 303aa AT4G13640.1 1st_1st 0.635338345 Ia
Pt029591 not found in 307aa AT4G13640.1 not_1st 0.635338345 II
Pt004779 not found in 309aa AT4G13640.1 not_1st 0.624060150 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13640.1     MYSAIRSSLPLDGSLGDYS---DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQL
pt004779_POPTR_ MYSAIH-SLPLDGH-GDFQASLDGINLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQL
pt029591_POPTR_ MYSAIH-SLPLDGH-GDFQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQL
pt029592_POPTR_ MYSAIH-SLPLDGH-GDFQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQL
                *****: ******  **:.   ** *** *****************:**********:**

AT4G13640.1     GGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDV---SCVAESQD
pt004779_POPTR_ GGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDVGIAPSVAESQD
pt029591_POPTR_ GGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDVGIAASVAESQD
pt029592_POPTR_ GGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKD----ASVAESQD
                *******************************:***:****** *****    ..******

AT4G13640.1     TGSSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSI
pt004779_POPTR_ TGSSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQHHLQLRIEAQGKYLQSI
pt029591_POPTR_ TGSSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSI
pt029592_POPTR_ TGSSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSI
                ****:::* *: **: *:.********.***************::***************

AT4G13640.1     LEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAV
pt004779_POPTR_ LEKACKALNDQAVATAGLEAAREELSELAIK--VSNECAG-IAPLDTMKM--PSLSELAA
pt029591_POPTR_ LEKACKALNDQAVATAGLEAAREELSELAIK--VSNERAG-IAPLDTMKM--PSISELAA
pt029592_POPTR_ LEKACKALNDQAVATAGLEAAREELSELAIK--VSNERAG-IAPLDTMKM--PSISELAA
                *******:::**** ****************  ::*   *  :.:** **  **:****.

AT4G13640.1     AIEHKN---------NCSAESSLTSSTVGSPVS-------AALMKKRQRGVFGNGDSVV-
pt004779_POPTR_ ALGNRNASNVPARIGDCSVESCLTST--SSPVSPMGVGSQVASTKKRSRPVLGNGDSLPF
pt029591_POPTR_ ALENKHASNVPARVGDCSVESCLTST--GSPVSPMGVGAQVASTKKRSRPVFGNGDSLPF
pt029592_POPTR_ ALENKHASNVPARVGDCSVESCLTST--GSPVSPMGVGAQVASTKKRSRPVFGNGDSLPF
                *: :::         :**.**.***:  .****       .*  ***.* *:*****:  

AT4G13640.1     ---VGHDAGWVMPSSSIG--
pt004779_POPTR_ EGNFRQEVEWTM--SNIVDE
pt029591_POPTR_ DGNIQQEVEWTM--NNIV--
pt029592_POPTR_ DGNIQQEVEWTM--NNIV--
                   . ::. *.*  ..*
BoxShade v3.31 C (beta, 970507) Output
AT4G13640.1     M Y S A I R S S L P L D G S L G D Y S - - - D G T N L P I D A C L V L T T D P K P R L R W T S E L H E R F V D A V T Q L
pt004779_POPTR_    M Y S A I H - S L P L D G H - G D F Q A S L D G I N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V T Q L
pt029591_POPTR_    M Y S A I H - S L P L D G H - G D F Q A A L D G T N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V A Q L
pt029592_POPTR_    M Y S A I H - S L P L D G H - G D F Q A A L D G T N L P G D A C L V L T T D P K P R L R W T A E L H E R F V D A V A Q L
 
AT4G13640.1     G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K F R L G R Q S C K E S I D N S K D V - - - S C V A E S Q D
pt004779_POPTR_    G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D V G I A P S V A E S Q D
pt029591_POPTR_    G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D V G I A A S V A E S Q D
pt029592_POPTR_    G G P D K A T P K T I M R T M G V K G L T L Y H L K S H L Q K Y R L G K Q S C K E S T D N S K D - - - - A S V A E S Q D
 
AT4G13640.1     T G S S S T S S L R L A A Q E Q N E S Y Q V T E A L R A Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S I
pt004779_POPTR_    T G S S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q H H L Q L R I E A Q G K Y L Q S I
pt029591_POPTR_    T G S S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S I
pt029592_POPTR_    T G S S T S A S S R M I A Q D L N D G Y Q V T E A L R V Q M E V Q R R L H E Q L E V Q R R L Q L R I E A Q G K Y L Q S I
 
AT4G13640.1     L E K A C K A I E E Q A V A F A G L E A A R E E L S E L A I K A S I T N G C Q G T T S T F D T T K M M I P S L S E L A V
pt004779_POPTR_    L E K A C K A L N D Q A V A T A G L E A A R E E L S E L A I K - - V S N E C A G - I A P L D T M K M - - P S L S E L A A
pt029591_POPTR_    L E K A C K A L N D Q A V A T A G L E A A R E E L S E L A I K - - V S N E R A G - I A P L D T M K M - - P S I S E L A A
pt029592_POPTR_    L E K A C K A L N D Q A V A T A G L E A A R E E L S E L A I K - - V S N E R A G - I A P L D T M K M - - P S I S E L A A
 
AT4G13640.1     A I E H K N - - - - - - - - - N C S A E S S L T S S T V G S P V S - - - - - - - A A L M K K R Q R G V F G N G D S V V -
pt004779_POPTR_    A L G N R N A S N V P A R I G D C S V E S C L T S T - - S S P V S P M G V G S Q V A S T K K R S R P V L G N G D S L P F
pt029591_POPTR_    A L E N K H A S N V P A R V G D C S V E S C L T S T - - G S P V S P M G V G A Q V A S T K K R S R P V F G N G D S L P F
pt029592_POPTR_    A L E N K H A S N V P A R V G D C S V E S C L T S T - - G S P V S P M G V G A Q V A S T K K R S R P V F G N G D S L P F
 
AT4G13640.1     - - - V G H D A G W V M P S S S I G - -
pt004779_POPTR_    E G N F R Q E V E W T M - - S N I V D E
pt029591_POPTR_    D G N I Q Q E V E W T M - - N N I V - -
pt029592_POPTR_    D G N I Q Q E V E W T M - - N N I V - -
 
0