fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13980.1 QNFSNKLRLELSPADS at 254/466 in AT4G13980.1
GSFSCHLNLTLASAPL at 349/466 in AT4G13980.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020902 QDFSNKLRLELSPAVS in 243/477 AT4G13980.1 not_1st 0.528639618 II
DSLSCQLNLTLASCPL in 342/477
Pt004556 QDFSNKLRLELSPAVS in 247/485 AT4G13980.1 not_1st 0.559665871 II
GLISCQLNLTLASSAL in 351/485
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13980.1     MNGALGNSSASVSGGEGAGGPAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSR
gm020902_Glyma0 MDG--APQSA--------GGPAPFLLKTYEMVDDASTNDIVSWSSTNNSFVVWNPPEFAR
pt004556_POPTR_ MEAGSSPSAAA------GGGPAPFLIKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFAR
                *:.  . .:*        *******:***:****:**::*****:.:***:*** .**:*

AT4G13980.1     LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHS
gm020902_Glyma0 LLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDEFLKDQKHLLKNIHRRKPIHSHS
pt004556_POPTR_ LLLPTFFKHNNFSSFIRQLNTYGFRKIDPEKWEFANEDFLKDQKHLLKNIHRRKPIHSHS
                *****:*********************.**:*** *::*:********************

AT4G13980.1     HPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQ
gm020902_Glyma0 HPPGSLVDPERAAFEEEIDKLSREKNSLESNIRNFKQHQSTAKPKLEDFLQRLDGVDKRQ
pt004556_POPTR_ NPQGSLVDQERAAYEEEIDKLSRDKAKLEASILGFSQQRSSAKLHVEDLTQRIDTMQQRQ
                :* .* .* ***. :*::*****:*  :*:.:  *.*::  ** :.*:: :::* :::**

AT4G13980.1     KKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPSEDSHLDNSSGSS
gm020902_Glyma0 KQLLNFFEKALQNPTFVEHLSRKIESMDLSAY-KKRRLPQVDHVQPVAESSLVDNHS-NF
pt004556_POPTR_ EKLLSFLEKAVQNPAFVEHLACKIESMDFSAYSKKRRLPQVDHSMPTAENSFVENHC-SS
                ::**.*:*.*::**:**:::. *:*.:*:*** ******:*::  * :*.* ::* . . 

AT4G13980.1     RRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSGGDPNTTLTKR
gm020902_Glyma0 RMEFGNVFRQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGESSQKKLSEVEPRGVQTRT
pt004556_POPTR_ RPE-SNVIYQDFSNKLRLELSPAVSDINLISRSTQSSNEDGGSPQRKISEGNPKDGPTRT
                * * .*:: *:************ **:*::*:* *****:* *.:  :*  :*.   *: 

AT4G13980.1     EGLPFAPEALELADTGTC---------PRRLLLNDNTRVETLQQRLTSSEETDGSFSCHL
gm020902_Glyma0 A-LTFAPETLELADTGASFTFKMDSCLSRRATTAESSKLISLEP---SSEEGDSL-SCQL
pt004556_POPTR_ SGLLLAPETLELSDTGTSYTFKVNPAVPRDLPASGSQAQHSLQANLTSNEEVDGLISCQL
                  * :***:***:***:.         .*      .    :*:    *.** *.  **:*

AT4G13980.1     NLTLASAPLPDKTASQIA-------KTTLKSQELNFN------------SIETSASEKNR
gm020902_Glyma0 NLTLASCPLQVNRNSYSARSPQIDCQEIGKLAESRFFANGKESDSGVSSNLNVAAEATNL
pt004556_POPTR_ NLTLASSALQVNKNPYLARMPPLR-QEIVKSPESRFNESNKDSDMRVIQNMNLGNEGTTL
                ******..*  :  .  *       :   *  * .*             .:: . . .. 

AT4G13980.1     GRQEIAVGGSQANAAPPARVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEEKRNGS
gm020902_Glyma0 ASSQEAPSNNQVNPAPPDRVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQDEGRSTH
pt004556_POPTR_ SSSQEIPNNSQVPASAPARVNDGFWEQFLTERPGSYENEEASSNYRANSYDEQDERRLGF
                . .:   ...*. .:.* **** ***********. :**** *.**.*.*:**:* *   

AT4G13980.1     MMLRNTKNIEQLTL
gm020902_Glyma0 GISRNIKNMDQLTL
pt004556_POPTR_ GVPRNAKNMEQLSL
                 : ** **::**:*
BoxShade v3.31 C (beta, 970507) Output
AT4G13980.1     M N G A L G N S S A S V S G G E G A G G P A P F L V K T Y E M V D D S S T D Q I V S W S A N N N S F I V W N H A E F S R
gm020902_Glyma0    M D G - - A P Q S A - - - - - - - - G G P A P F L L K T Y E M V D D A S T N D I V S W S S T N N S F V V W N P P E F A R
pt004556_POPTR_    M E A G S S P S A A A - - - - - - G G G P A P F L I K T Y D M V D D S S T D E I V S W S S N K N S F V V W N P P E F A R
 
AT4G13980.1     L L L P T Y F K H N N F S S F I R Q L N T Y G F R K I D P E R W E F L N D D F I K D Q K H L L K N I H R R K P I H S H S
gm020902_Glyma0    L L L P T Y F K H N N F S S F I R Q L N T Y G F R K I H P E R W E F A N D E F L K D Q K H L L K N I H R R K P I H S H S
pt004556_POPTR_    L L L P T F F K H N N F S S F I R Q L N T Y G F R K I D P E K W E F A N E D F L K D Q K H L L K N I H R R K P I H S H S
 
AT4G13980.1     H P P A S S T D Q E R A V L Q E Q M D K L S R E K A A I E A K L L K F K Q Q K V V A K H Q F E E M T E H V D D M E N R Q
gm020902_Glyma0    H P P G S L V D P E R A A F E E E I D K L S R E K N S L E S N I R N F K Q H Q S T A K P K L E D F L Q R L D G V D K R Q
pt004556_POPTR_    N P Q G S L V D Q E R A A Y E E E I D K L S R D K A K L E A S I L G F S Q Q R S S A K L H V E D L T Q R I D T M Q Q R Q
 
AT4G13980.1     K K L L N F L E T A I R N P T F V K N F G K K V E Q L D I S A Y N K K R R L P E V E Q S K P P S E D S H L D N S S G S S
gm020902_Glyma0    K Q L L N F F E K A L Q N P T F V E H L S R K I E S M D L S A Y - K K R R L P Q V D H V Q P V A E S S L V D N H S - N F
pt004556_POPTR_    E K L L S F L E K A V Q N P A F V E H L A C K I E S M D F S A Y S K K R R L P Q V D H S M P T A E N S F V E N H C - S S
 
AT4G13980.1     R R E S G N I F H Q N F S N K L R L E L S P A D S D M N M V S H S I Q S S N E E G A S P K G I L S G G D P N T T L T K R
gm020902_Glyma0    R M E F G N V F R Q D F S N K L R L E L S P A V S D M N L V S R S T Q S S N E D G E S S Q K K L S E V E P R G V Q T R T
pt004556_POPTR_    R P E - S N V I Y Q D F S N K L R L E L S P A V S D I N L I S R S T Q S S N E D G G S P Q R K I S E G N P K D G P T R T
 
AT4G13980.1     E G L P F A P E A L E L A D T G T C - - - - - - - - - P R R L L L N D N T R V E T L Q Q R L T S S E E T D G S F S C H L
gm020902_Glyma0    A - L T F A P E T L E L A D T G A S F T F K M D S C L S R R A T T A E S S K L I S L E P - - - S S E E G D S L - S C Q L
pt004556_POPTR_    S G L L L A P E T L E L S D T G T S Y T F K V N P A V P R D L P A S G S Q A Q H S L Q A N L T S N E E V D G L I S C Q L
 
AT4G13980.1     N L T L A S A P L P D K T A S Q I A - - - - - - - K T T L K S Q E L N F N - - - - - - - - - - - - S I E T S A S E K N R
gm020902_Glyma0    N L T L A S C P L Q V N R N S Y S A R S P Q I D C Q E I G K L A E S R F F A N G K E S D S G V S S N L N V A A E A T N L
pt004556_POPTR_    N L T L A S S A L Q V N K N P Y L A R M P P L R - Q E I V K S P E S R F N E S N K D S D M R V I Q N M N L G N E G T T L
 
AT4G13980.1     G R Q E I A V G G S Q A N A A P P A R V N D V F W E Q F L T E R P G S S D N E E A S S T Y R G N P Y E E Q E E K R N G S
gm020902_Glyma0    A S S Q E A P S N N Q V N P A P P D R V N D V F W E Q F L T E R P G C S D N E E A I S N Y R A N P Y D E Q D E G R S T H
pt004556_POPTR_    S S S Q E I P N N S Q V P A S A P A R V N D G F W E Q F L T E R P G S Y E N E E A S S N Y R A N S Y D E Q D E R R L G F
 
AT4G13980.1     M M L R N T K N I E Q L T L
gm020902_Glyma0    G I S R N I K N M D Q L T L
pt004556_POPTR_    G V P R N A K N M E Q L S L
 
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