Input
| Putative repression domain
|
|
AT4G13980.1 |
QNFSNKLRLELSPADS at 254/466 in AT4G13980.1 |
|
GSFSCHLNLTLASAPL at 349/466 in AT4G13980.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt004556 |
QDFSNKLRLELSPAVS in 247/485 |
AT4G13980.1 |
not_1st |
0.559665871 |
II |
GLISCQLNLTLASSAL in 351/485 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G13980.1 MNGALGNSSASVSGGEGAGGPAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSR
pt004556_POPTR_ MEA--GSSPSAAAG----GGPAPFLIKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFAR
*:. *.*.::.:* *******:***:********:*****:*:***:*** .**:*
AT4G13980.1 LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHS
pt004556_POPTR_ LLLPTFFKHNNFSSFIRQLNTYGFRKIDPEKWEFANEDFLKDQKHLLKNIHRRKPIHSHS
*****:************************:*** *:**:********************
AT4G13980.1 HPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQ
pt004556_POPTR_ NPQGSLVDQERAAYEEEIDKLSRDKAKLEASILGFSQQRSSAKLHVEDLTQRIDTMQQRQ
:* .* .*****. :*::*****:** :**.:* *.**: ** :.*::*:::* *::**
AT4G13980.1 KKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPSEDSHLDNSSGSS
pt004556_POPTR_ EKLLSFLEKAVQNPAFVEHLACKIESMDFSAYSKKRRLPQVDHSMPTAENSFVENHC-SS
:***.***.*::**:**:::. *:*.:*:***.******:*::* *.:*:*.::* . **
AT4G13980.1 RRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSGGDPNTTLTKR
pt004556_POPTR_ RPES-NVIYQDFSNKLRLELSPAVSDINLISRSTQSSNEDGGSPQRKISEGNPKDGPTRT
* ** *:::*:************ **:*::*:* *****:*.**: :* *:*: *:
AT4G13980.1 EGLPFAPEALELADTGT---------CPRRLLLNDNTRVETLQQRLTSSEETDGSFSCHL
pt004556_POPTR_ SGLLLAPETLELSDTGTSYTFKVNPAVPRDLPASGSQAQHSLQANLTSNEEVDGLISCQL
.** :***:***:**** ** * ... .:** .***.**.** :**:*
AT4G13980.1 NLTLASAPLPDKTASQIAKT------TLKSQELNFNSIETSASEKNRGRQEIAVG-----
pt004556_POPTR_ NLTLASSALQVNKNPYLARMPPLRQEIVKSPESRFN--ESNKDSDMRVIQNMNLGNEGTT
******:.* :. . :*: :** * .** *:. ... * *:: :*
AT4G13980.1 ---------GSQANAAPPARVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEEKRNG
pt004556_POPTR_ LSSSQEIPNNSQVPASAPARVNDGFWEQFLTERPGSYENEEASSNYRANSYDEQDERRLG
.**. *:.****** ************ :******.**.*.*:**:*:* *
AT4G13980.1 SMMLRNTKNIEQLTL
pt004556_POPTR_ FGVPRNAKNMEQLSL
: **:**:***:*
BoxShade v3.31 C (beta, 970507) Output
AT4G13980.1 |
M |
N |
G |
A |
L |
G |
N |
S |
S |
A |
S |
V |
S |
G |
G |
E |
G |
A |
G |
G |
P |
A |
P |
F |
L |
V |
K |
T |
Y |
E |
M |
V |
D |
D |
S |
S |
T |
D |
Q |
I |
V |
S |
W |
S |
A |
N |
N |
N |
S |
F |
I |
V |
W |
N |
H |
A |
E |
F |
S |
R |
pt004556_POPTR_ |
M |
E |
A |
- |
- |
G |
S |
S |
P |
S |
A |
A |
A |
G |
- |
- |
- |
- |
G |
G |
P |
A |
P |
F |
L |
I |
K |
T |
Y |
D |
M |
V |
D |
D |
S |
S |
T |
D |
E |
I |
V |
S |
W |
S |
S |
N |
K |
N |
S |
F |
V |
V |
W |
N |
P |
P |
E |
F |
A |
R |
|
AT4G13980.1 |
L |
L |
L |
P |
T |
Y |
F |
K |
H |
N |
N |
F |
S |
S |
F |
I |
R |
Q |
L |
N |
T |
Y |
G |
F |
R |
K |
I |
D |
P |
E |
R |
W |
E |
F |
L |
N |
D |
D |
F |
I |
K |
D |
Q |
K |
H |
L |
L |
K |
N |
I |
H |
R |
R |
K |
P |
I |
H |
S |
H |
S |
pt004556_POPTR_ |
L |
L |
L |
P |
T |
F |
F |
K |
H |
N |
N |
F |
S |
S |
F |
I |
R |
Q |
L |
N |
T |
Y |
G |
F |
R |
K |
I |
D |
P |
E |
K |
W |
E |
F |
A |
N |
E |
D |
F |
L |
K |
D |
Q |
K |
H |
L |
L |
K |
N |
I |
H |
R |
R |
K |
P |
I |
H |
S |
H |
S |
|
AT4G13980.1 |
H |
P |
P |
A |
S |
S |
T |
D |
Q |
E |
R |
A |
V |
L |
Q |
E |
Q |
M |
D |
K |
L |
S |
R |
E |
K |
A |
A |
I |
E |
A |
K |
L |
L |
K |
F |
K |
Q |
Q |
K |
V |
V |
A |
K |
H |
Q |
F |
E |
E |
M |
T |
E |
H |
V |
D |
D |
M |
E |
N |
R |
Q |
pt004556_POPTR_ |
N |
P |
Q |
G |
S |
L |
V |
D |
Q |
E |
R |
A |
A |
Y |
E |
E |
E |
I |
D |
K |
L |
S |
R |
D |
K |
A |
K |
L |
E |
A |
S |
I |
L |
G |
F |
S |
Q |
Q |
R |
S |
S |
A |
K |
L |
H |
V |
E |
D |
L |
T |
Q |
R |
I |
D |
T |
M |
Q |
Q |
R |
Q |
|
AT4G13980.1 |
K |
K |
L |
L |
N |
F |
L |
E |
T |
A |
I |
R |
N |
P |
T |
F |
V |
K |
N |
F |
G |
K |
K |
V |
E |
Q |
L |
D |
I |
S |
A |
Y |
N |
K |
K |
R |
R |
L |
P |
E |
V |
E |
Q |
S |
K |
P |
P |
S |
E |
D |
S |
H |
L |
D |
N |
S |
S |
G |
S |
S |
pt004556_POPTR_ |
E |
K |
L |
L |
S |
F |
L |
E |
K |
A |
V |
Q |
N |
P |
A |
F |
V |
E |
H |
L |
A |
C |
K |
I |
E |
S |
M |
D |
F |
S |
A |
Y |
S |
K |
K |
R |
R |
L |
P |
Q |
V |
D |
H |
S |
M |
P |
T |
A |
E |
N |
S |
F |
V |
E |
N |
H |
C |
- |
S |
S |
|
AT4G13980.1 |
R |
R |
E |
S |
G |
N |
I |
F |
H |
Q |
N |
F |
S |
N |
K |
L |
R |
L |
E |
L |
S |
P |
A |
D |
S |
D |
M |
N |
M |
V |
S |
H |
S |
I |
Q |
S |
S |
N |
E |
E |
G |
A |
S |
P |
K |
G |
I |
L |
S |
G |
G |
D |
P |
N |
T |
T |
L |
T |
K |
R |
pt004556_POPTR_ |
R |
P |
E |
S |
- |
N |
V |
I |
Y |
Q |
D |
F |
S |
N |
K |
L |
R |
L |
E |
L |
S |
P |
A |
V |
S |
D |
I |
N |
L |
I |
S |
R |
S |
T |
Q |
S |
S |
N |
E |
D |
G |
G |
S |
P |
Q |
R |
K |
I |
S |
E |
G |
N |
P |
K |
D |
G |
P |
T |
R |
T |
|
AT4G13980.1 |
E |
G |
L |
P |
F |
A |
P |
E |
A |
L |
E |
L |
A |
D |
T |
G |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
P |
R |
R |
L |
L |
L |
N |
D |
N |
T |
R |
V |
E |
T |
L |
Q |
Q |
R |
L |
T |
S |
S |
E |
E |
T |
D |
G |
S |
F |
S |
C |
H |
L |
pt004556_POPTR_ |
S |
G |
L |
L |
L |
A |
P |
E |
T |
L |
E |
L |
S |
D |
T |
G |
T |
S |
Y |
T |
F |
K |
V |
N |
P |
A |
V |
P |
R |
D |
L |
P |
A |
S |
G |
S |
Q |
A |
Q |
H |
S |
L |
Q |
A |
N |
L |
T |
S |
N |
E |
E |
V |
D |
G |
L |
I |
S |
C |
Q |
L |
|
AT4G13980.1 |
N |
L |
T |
L |
A |
S |
A |
P |
L |
P |
D |
K |
T |
A |
S |
Q |
I |
A |
K |
T |
- |
- |
- |
- |
- |
- |
T |
L |
K |
S |
Q |
E |
L |
N |
F |
N |
S |
I |
E |
T |
S |
A |
S |
E |
K |
N |
R |
G |
R |
Q |
E |
I |
A |
V |
G |
- |
- |
- |
- |
- |
pt004556_POPTR_ |
N |
L |
T |
L |
A |
S |
S |
A |
L |
Q |
V |
N |
K |
N |
P |
Y |
L |
A |
R |
M |
P |
P |
L |
R |
Q |
E |
I |
V |
K |
S |
P |
E |
S |
R |
F |
N |
- |
- |
E |
S |
N |
K |
D |
S |
D |
M |
R |
V |
I |
Q |
N |
M |
N |
L |
G |
N |
E |
G |
T |
T |
|
AT4G13980.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
S |
Q |
A |
N |
A |
A |
P |
P |
A |
R |
V |
N |
D |
V |
F |
W |
E |
Q |
F |
L |
T |
E |
R |
P |
G |
S |
S |
D |
N |
E |
E |
A |
S |
S |
T |
Y |
R |
G |
N |
P |
Y |
E |
E |
Q |
E |
E |
K |
R |
N |
G |
pt004556_POPTR_ |
L |
S |
S |
S |
Q |
E |
I |
P |
N |
N |
S |
Q |
V |
P |
A |
S |
A |
P |
A |
R |
V |
N |
D |
G |
F |
W |
E |
Q |
F |
L |
T |
E |
R |
P |
G |
S |
Y |
E |
N |
E |
E |
A |
S |
S |
N |
Y |
R |
A |
N |
S |
Y |
D |
E |
Q |
D |
E |
R |
R |
L |
G |
|
AT4G13980.1 |
S |
M |
M |
L |
R |
N |
T |
K |
N |
I |
E |
Q |
L |
T |
L |
pt004556_POPTR_ |
F |
G |
V |
P |
R |
N |
A |
K |
N |
M |
E |
Q |
L |
S |
L |
|
|