Input
| Putative repression domain
|
|
AT4G13980.1 |
QNFSNKLRLELSPADS at 254/466 in AT4G13980.1 |
|
GSFSCHLNLTLASAPL at 349/466 in AT4G13980.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt030726 |
QDFPDKLRLELSPAVS in 252/490 |
AT4G13980.1 |
1st_1st |
0.568019093 |
Ia |
GHISCQLNLSLASSPL in 356/490 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G13980.1 MNGALGNSSA-SVSGGEGAGGPAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFS
pt030726_POPTR_ MEA--GPSSATSGGGGGGGGGPAPFLVKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFA
*:. * *** * .** *.***********:********:*****:*:***:*** .**:
AT4G13980.1 RLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSH
pt030726_POPTR_ RLLLPTFFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIYRRKPIHSH
******:**************************** *:**:**********:********
AT4G13980.1 SHPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENR
pt030726_POPTR_ SQPQGSLVDPERAAYEEEIEKLARDKAKLKASILGFEQQRSSAKLQVEDLTQKIDTMQQR
*:* .* .* ***. :*:::**:*:** ::*.:* *:**: ** *.*::*:::* *::*
AT4G13980.1 QKKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPSEDSHLDNSSGS
pt030726_POPTR_ QEKLLSFLEKAVQNPTFVEHLARKIEAMDFSAYSKKRRLPQVDHPMPIAENSLVENHS-S
*:***.***.*::*****:::.:*:* :*:***.******:*::. * :*:* ::* * *
AT4G13980.1 SRRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSGGDPNTTLTK
pt030726_POPTR_ SRPES-NVIHQDFPDKLRLELSPAVSDINLVSHSTQSSNEDGGSPQRKISEGNPKDALTR
** ** *::**:*.:********* **:*:**** *****:*.**: :* *:*: :**:
AT4G13980.1 REGLPFAPEALELADTG---------TCPRRLLLNDNTRVETLQQRLTSSEETDGSFSCH
pt030726_POPTR_ TSGLLLAPETLELSDTGASYAFKVNPAVPRDIPANGSPALHSLQSNLTSNEEVDGHISCQ
.** :***:***:*** : ** : *... :.:**..***.**.** :**:
AT4G13980.1 LNLTLASAPL-----PDKT-ASQIAKTTLKSQELNFNS------IETSASEKNRGRQEIA
pt030726_POPTR_ LNLSLASSPLQVNKNPYLTRIPQLGQEIGKSPESRFNESNKDSDIRVSQNNMNLGNEVRA
***:***:** * * .*:.: ** * .**. *..* .: * *.: *
AT4G13980.1 VGGS-------QANAAPPARVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEEKRNG
pt030726_POPTR_ LSNSQETPNNNQAPASAPVRVNDVFWEQFLTERPGYSDNEEASSNYRANPYDER-ERRIG
:..* ** *:.*.**************** ********.**.***:*: *:* *
AT4G13980.1 SMMLRNTKNIEQLTL
pt030726_POPTR_ FGVPRNAKNMEQLSL
: **:**:***:*
BoxShade v3.31 C (beta, 970507) Output
AT4G13980.1 |
M |
N |
G |
A |
L |
G |
N |
S |
S |
A |
- |
S |
V |
S |
G |
G |
E |
G |
A |
G |
G |
P |
A |
P |
F |
L |
V |
K |
T |
Y |
E |
M |
V |
D |
D |
S |
S |
T |
D |
Q |
I |
V |
S |
W |
S |
A |
N |
N |
N |
S |
F |
I |
V |
W |
N |
H |
A |
E |
F |
S |
pt030726_POPTR_ |
M |
E |
A |
- |
- |
G |
P |
S |
S |
A |
T |
S |
G |
G |
G |
G |
G |
G |
G |
G |
G |
P |
A |
P |
F |
L |
V |
K |
T |
Y |
D |
M |
V |
D |
D |
S |
S |
T |
D |
E |
I |
V |
S |
W |
S |
S |
N |
K |
N |
S |
F |
V |
V |
W |
N |
P |
P |
E |
F |
A |
|
AT4G13980.1 |
R |
L |
L |
L |
P |
T |
Y |
F |
K |
H |
N |
N |
F |
S |
S |
F |
I |
R |
Q |
L |
N |
T |
Y |
G |
F |
R |
K |
I |
D |
P |
E |
R |
W |
E |
F |
L |
N |
D |
D |
F |
I |
K |
D |
Q |
K |
H |
L |
L |
K |
N |
I |
H |
R |
R |
K |
P |
I |
H |
S |
H |
pt030726_POPTR_ |
R |
L |
L |
L |
P |
T |
F |
F |
K |
H |
N |
N |
F |
S |
S |
F |
I |
R |
Q |
L |
N |
T |
Y |
G |
F |
R |
K |
I |
D |
P |
E |
R |
W |
E |
F |
A |
N |
E |
D |
F |
V |
K |
D |
Q |
K |
H |
L |
L |
K |
N |
I |
Y |
R |
R |
K |
P |
I |
H |
S |
H |
|
AT4G13980.1 |
S |
H |
P |
P |
A |
S |
S |
T |
D |
Q |
E |
R |
A |
V |
L |
Q |
E |
Q |
M |
D |
K |
L |
S |
R |
E |
K |
A |
A |
I |
E |
A |
K |
L |
L |
K |
F |
K |
Q |
Q |
K |
V |
V |
A |
K |
H |
Q |
F |
E |
E |
M |
T |
E |
H |
V |
D |
D |
M |
E |
N |
R |
pt030726_POPTR_ |
S |
Q |
P |
Q |
G |
S |
L |
V |
D |
P |
E |
R |
A |
A |
Y |
E |
E |
E |
I |
E |
K |
L |
A |
R |
D |
K |
A |
K |
L |
K |
A |
S |
I |
L |
G |
F |
E |
Q |
Q |
R |
S |
S |
A |
K |
L |
Q |
V |
E |
D |
L |
T |
Q |
K |
I |
D |
T |
M |
Q |
Q |
R |
|
AT4G13980.1 |
Q |
K |
K |
L |
L |
N |
F |
L |
E |
T |
A |
I |
R |
N |
P |
T |
F |
V |
K |
N |
F |
G |
K |
K |
V |
E |
Q |
L |
D |
I |
S |
A |
Y |
N |
K |
K |
R |
R |
L |
P |
E |
V |
E |
Q |
S |
K |
P |
P |
S |
E |
D |
S |
H |
L |
D |
N |
S |
S |
G |
S |
pt030726_POPTR_ |
Q |
E |
K |
L |
L |
S |
F |
L |
E |
K |
A |
V |
Q |
N |
P |
T |
F |
V |
E |
H |
L |
A |
R |
K |
I |
E |
A |
M |
D |
F |
S |
A |
Y |
S |
K |
K |
R |
R |
L |
P |
Q |
V |
D |
H |
P |
M |
P |
I |
A |
E |
N |
S |
L |
V |
E |
N |
H |
S |
- |
S |
|
AT4G13980.1 |
S |
R |
R |
E |
S |
G |
N |
I |
F |
H |
Q |
N |
F |
S |
N |
K |
L |
R |
L |
E |
L |
S |
P |
A |
D |
S |
D |
M |
N |
M |
V |
S |
H |
S |
I |
Q |
S |
S |
N |
E |
E |
G |
A |
S |
P |
K |
G |
I |
L |
S |
G |
G |
D |
P |
N |
T |
T |
L |
T |
K |
pt030726_POPTR_ |
S |
R |
P |
E |
S |
- |
N |
V |
I |
H |
Q |
D |
F |
P |
D |
K |
L |
R |
L |
E |
L |
S |
P |
A |
V |
S |
D |
I |
N |
L |
V |
S |
H |
S |
T |
Q |
S |
S |
N |
E |
D |
G |
G |
S |
P |
Q |
R |
K |
I |
S |
E |
G |
N |
P |
K |
D |
A |
L |
T |
R |
|
AT4G13980.1 |
R |
E |
G |
L |
P |
F |
A |
P |
E |
A |
L |
E |
L |
A |
D |
T |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
C |
P |
R |
R |
L |
L |
L |
N |
D |
N |
T |
R |
V |
E |
T |
L |
Q |
Q |
R |
L |
T |
S |
S |
E |
E |
T |
D |
G |
S |
F |
S |
C |
H |
pt030726_POPTR_ |
T |
S |
G |
L |
L |
L |
A |
P |
E |
T |
L |
E |
L |
S |
D |
T |
G |
A |
S |
Y |
A |
F |
K |
V |
N |
P |
A |
V |
P |
R |
D |
I |
P |
A |
N |
G |
S |
P |
A |
L |
H |
S |
L |
Q |
S |
N |
L |
T |
S |
N |
E |
E |
V |
D |
G |
H |
I |
S |
C |
Q |
|
AT4G13980.1 |
L |
N |
L |
T |
L |
A |
S |
A |
P |
L |
- |
- |
- |
- |
- |
P |
D |
K |
T |
- |
A |
S |
Q |
I |
A |
K |
T |
T |
L |
K |
S |
Q |
E |
L |
N |
F |
N |
S |
- |
- |
- |
- |
- |
- |
I |
E |
T |
S |
A |
S |
E |
K |
N |
R |
G |
R |
Q |
E |
I |
A |
pt030726_POPTR_ |
L |
N |
L |
S |
L |
A |
S |
S |
P |
L |
Q |
V |
N |
K |
N |
P |
Y |
L |
T |
R |
I |
P |
Q |
L |
G |
Q |
E |
I |
G |
K |
S |
P |
E |
S |
R |
F |
N |
E |
S |
N |
K |
D |
S |
D |
I |
R |
V |
S |
Q |
N |
N |
M |
N |
L |
G |
N |
E |
V |
R |
A |
|
AT4G13980.1 |
V |
G |
G |
S |
- |
- |
- |
- |
- |
- |
- |
Q |
A |
N |
A |
A |
P |
P |
A |
R |
V |
N |
D |
V |
F |
W |
E |
Q |
F |
L |
T |
E |
R |
P |
G |
S |
S |
D |
N |
E |
E |
A |
S |
S |
T |
Y |
R |
G |
N |
P |
Y |
E |
E |
Q |
E |
E |
K |
R |
N |
G |
pt030726_POPTR_ |
L |
S |
N |
S |
Q |
E |
T |
P |
N |
N |
N |
Q |
A |
P |
A |
S |
A |
P |
V |
R |
V |
N |
D |
V |
F |
W |
E |
Q |
F |
L |
T |
E |
R |
P |
G |
Y |
S |
D |
N |
E |
E |
A |
S |
S |
N |
Y |
R |
A |
N |
P |
Y |
D |
E |
R |
- |
E |
R |
R |
I |
G |
|
AT4G13980.1 |
S |
M |
M |
L |
R |
N |
T |
K |
N |
I |
E |
Q |
L |
T |
L |
pt030726_POPTR_ |
F |
G |
V |
P |
R |
N |
A |
K |
N |
M |
E |
Q |
L |
S |
L |
|
|