fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13980.1 QNFSNKLRLELSPADS at 254/466 in AT4G13980.1
GSFSCHLNLTLASAPL at 349/466 in AT4G13980.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030726 QDFPDKLRLELSPAVS in 252/490 AT4G13980.1 1st_1st 0.568019093 Ia
GHISCQLNLSLASSPL in 356/490
Pt004556 QDFSNKLRLELSPAVS in 247/485 AT4G13980.1 not_1st 0.559665871 II
GLISCQLNLTLASSAL in 351/485
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G13980.1     MNGALGNSSA-SVSGGEGAGGPAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFS
pt030726_POPTR_ MEAG--PSSATSGGGGGGGGGPAPFLVKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFA
pt004556_POPTR_ MEAGSSPSAA-------AGGGPAPFLIKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFA
                *:..   *:*       ..*******:***:********:*****:*:***:*** .**:

AT4G13980.1     RLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSH
pt030726_POPTR_ RLLLPTFFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIYRRKPIHSH
pt004556_POPTR_ RLLLPTFFKHNNFSSFIRQLNTYGFRKIDPEKWEFANEDFLKDQKHLLKNIHRRKPIHSH
                ******:************************:*** *:**:**********:********

AT4G13980.1     SHPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENR
pt030726_POPTR_ SQPQGSLVDPERAAYEEEIEKLARDKAKLKASILGFEQQRSSAKLQVEDLTQKIDTMQQR
pt004556_POPTR_ SNPQGSLVDQERAAYEEEIDKLSRDKAKLEASILGFSQQRSSAKLHVEDLTQRIDTMQQR
                *:* .* .* ***. :*:::**:*:** ::*.:* *.**:  ** :.*::*:::* *::*

AT4G13980.1     QKKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPSEDSHLDNSSGS
pt030726_POPTR_ QEKLLSFLEKAVQNPTFVEHLARKIEAMDFSAYSKKRRLPQVDHPMPIAENSLVENHS-S
pt004556_POPTR_ QEKLLSFLEKAVQNPAFVEHLACKIESMDFSAYSKKRRLPQVDHSMPTAENSFVENHC-S
                *:***.***.*::**:**:::. *:* :*:***.******:*::. * :*:* ::* . *

AT4G13980.1     SRRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSGGDPNTTLTK
pt030726_POPTR_ SRPES-NVIHQDFPDKLRLELSPAVSDINLVSHSTQSSNEDGGSPQRKISEGNPKDALTR
pt004556_POPTR_ SRPES-NVIYQDFSNKLRLELSPAVSDINLISRSTQSSNEDGGSPQRKISEGNPKDGPTR
                ** ** *:::*:*.:********* **:*::*:* *****:*.**:  :* *:*:   *:

AT4G13980.1     REGLPFAPEALELADTGT---------CPRRLLLNDNTRVETLQQRLTSSEETDGSFSCH
pt030726_POPTR_ TSGLLLAPETLELSDTGASYAFKVNPAVPRDIPANGSPALHSLQSNLTSNEEVDGHISCQ
pt004556_POPTR_ TSGLLLAPETLELSDTGTSYTFKVNPAVPRDLPASGSQAQHSLQANLTSNEEVDGLISCQ
                 .** :***:***:***:          ** :  ...   .:** .***.**.** :**:

AT4G13980.1     LNLTLASAPLP-DKTA-----SQIAKTTLKSQELNFNS------IETSASEKNRGRQEIA
pt030726_POPTR_ LNLSLASSPLQVNKNPYLTRIPQLGQEIGKSPESRFNESNKDSDIRVSQNNMNLGNEVRA
pt004556_POPTR_ LNLTLASSALQVNKNPYLARMPPLRQEIVKSPESRFNESNKDSDMRVIQ-NMNLGNEGTT
                ***:***:.*  :*..     . : :   ** * .**.      :..   : * *.:  :

AT4G13980.1     VGGS-------QANAAPPARVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEEKRNG
pt030726_POPTR_ LSNSQETPNNNQAPASAPVRVNDVFWEQFLTERPGYSDNEEASSNYRANPYDER-ERRIG
pt004556_POPTR_ LSSSQEIPNNSQVPASAPARVNDGFWEQFLTERPGSYENEEASSNYRANSYDEQDERRLG
                :..*       *. *:.*.**** ***********  :******.**.*.*:*: *:* *

AT4G13980.1     SMMLRNTKNIEQLTL
pt030726_POPTR_ FGVPRNAKNMEQLSL
pt004556_POPTR_ FGVPRNAKNMEQLSL
                  : **:**:***:*
BoxShade v3.31 C (beta, 970507) Output
AT4G13980.1     M N G A L G N S S A - S V S G G E G A G G P A P F L V K T Y E M V D D S S T D Q I V S W S A N N N S F I V W N H A E F S
pt030726_POPTR_    M E A G - - P S S A T S G G G G G G G G G P A P F L V K T Y D M V D D S S T D E I V S W S S N K N S F V V W N P P E F A
pt004556_POPTR_    M E A G S S P S A A - - - - - - - A G G G P A P F L I K T Y D M V D D S S T D E I V S W S S N K N S F V V W N P P E F A
 
AT4G13980.1     R L L L P T Y F K H N N F S S F I R Q L N T Y G F R K I D P E R W E F L N D D F I K D Q K H L L K N I H R R K P I H S H
pt030726_POPTR_    R L L L P T F F K H N N F S S F I R Q L N T Y G F R K I D P E R W E F A N E D F V K D Q K H L L K N I Y R R K P I H S H
pt004556_POPTR_    R L L L P T F F K H N N F S S F I R Q L N T Y G F R K I D P E K W E F A N E D F L K D Q K H L L K N I H R R K P I H S H
 
AT4G13980.1     S H P P A S S T D Q E R A V L Q E Q M D K L S R E K A A I E A K L L K F K Q Q K V V A K H Q F E E M T E H V D D M E N R
pt030726_POPTR_    S Q P Q G S L V D P E R A A Y E E E I E K L A R D K A K L K A S I L G F E Q Q R S S A K L Q V E D L T Q K I D T M Q Q R
pt004556_POPTR_    S N P Q G S L V D Q E R A A Y E E E I D K L S R D K A K L E A S I L G F S Q Q R S S A K L H V E D L T Q R I D T M Q Q R
 
AT4G13980.1     Q K K L L N F L E T A I R N P T F V K N F G K K V E Q L D I S A Y N K K R R L P E V E Q S K P P S E D S H L D N S S G S
pt030726_POPTR_    Q E K L L S F L E K A V Q N P T F V E H L A R K I E A M D F S A Y S K K R R L P Q V D H P M P I A E N S L V E N H S - S
pt004556_POPTR_    Q E K L L S F L E K A V Q N P A F V E H L A C K I E S M D F S A Y S K K R R L P Q V D H S M P T A E N S F V E N H C - S
 
AT4G13980.1     S R R E S G N I F H Q N F S N K L R L E L S P A D S D M N M V S H S I Q S S N E E G A S P K G I L S G G D P N T T L T K
pt030726_POPTR_    S R P E S - N V I H Q D F P D K L R L E L S P A V S D I N L V S H S T Q S S N E D G G S P Q R K I S E G N P K D A L T R
pt004556_POPTR_    S R P E S - N V I Y Q D F S N K L R L E L S P A V S D I N L I S R S T Q S S N E D G G S P Q R K I S E G N P K D G P T R
 
AT4G13980.1     R E G L P F A P E A L E L A D T G T - - - - - - - - - C P R R L L L N D N T R V E T L Q Q R L T S S E E T D G S F S C H
pt030726_POPTR_    T S G L L L A P E T L E L S D T G A S Y A F K V N P A V P R D I P A N G S P A L H S L Q S N L T S N E E V D G H I S C Q
pt004556_POPTR_    T S G L L L A P E T L E L S D T G T S Y T F K V N P A V P R D L P A S G S Q A Q H S L Q A N L T S N E E V D G L I S C Q
 
AT4G13980.1     L N L T L A S A P L P - D K T A - - - - - S Q I A K T T L K S Q E L N F N S - - - - - - I E T S A S E K N R G R Q E I A
pt030726_POPTR_    L N L S L A S S P L Q V N K N P Y L T R I P Q L G Q E I G K S P E S R F N E S N K D S D I R V S Q N N M N L G N E V R A
pt004556_POPTR_    L N L T L A S S A L Q V N K N P Y L A R M P P L R Q E I V K S P E S R F N E S N K D S D M R V I Q - N M N L G N E G T T
 
AT4G13980.1     V G G S - - - - - - - Q A N A A P P A R V N D V F W E Q F L T E R P G S S D N E E A S S T Y R G N P Y E E Q E E K R N G
pt030726_POPTR_    L S N S Q E T P N N N Q A P A S A P V R V N D V F W E Q F L T E R P G Y S D N E E A S S N Y R A N P Y D E R - E R R I G
pt004556_POPTR_    L S S S Q E I P N N S Q V P A S A P A R V N D G F W E Q F L T E R P G S Y E N E E A S S N Y R A N S Y D E Q D E R R L G
 
AT4G13980.1     S M M L R N T K N I E Q L T L
pt030726_POPTR_    F G V P R N A K N M E Q L S L
pt004556_POPTR_    F G V P R N A K N M E Q L S L
 
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