fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G13980.1 QNFSNKLRLELSPADS at 254/466 in AT4G13980.1
GSFSCHLNLTLASAPL at 349/466 in AT4G13980.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012506 QDFSNKLRLELSPAVS in 245/479 AT4G13980.1 1st_1st 0.529832935 Ia
DSLSCQLNLTLASCPL in 344/479
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G13980.1     MNGALGNSSASVSGGEGAGGPAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSR
gm012506_Glyma0 MDGAPQSA--------GAGGPAPFLLKTYDMVDDASTNDIVSWSSTNNSFVVWNPPEFAR
                *:**  .:        *********:***:****:**::*****:.****:*** .**:*

AT4G13980.1     LLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHS
gm012506_Glyma0 LLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDEFLKDQKHLLKNIYRRKPIHSHS
                ***************************.****** **:*:**********:*********

AT4G13980.1     HPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQ
gm012506_Glyma0 HPPGSLVDPERAAFEEEIDKLSREKTSLESNIYNFKQHQSTAKPKLEDFLQRLDGIEQRQ
                ***.* .* ***.::*::*******:::*::: :***:: .** ::*:: :::*.:*:**

AT4G13980.1     KKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPSEDSHLDNSSGSS
gm012506_Glyma0 KQLLNFFEKALQNPTFVEHLSRKIESMDLSAY-KKRRLPQVDHVQPVAESSLVDSHS-NF
                *:****:*.*::*****:::.:*:*.:*:*** ******:*:: :* :*.* :*. * . 

AT4G13980.1     RRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSGGDPNTTLTKR
gm012506_Glyma0 RMEFGNVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGESPQKKLSEVEPKGVQT-R
                * * **:***:************ ****:**:* *****:* **:  **  :*: . * *

AT4G13980.1     EGLPFAPEALELADTG--------TC-PRRLLLNDNTRVETLQQRLTSSEETDGSFSCHL
gm012506_Glyma0 TALTFAPETLELADTGASFTFKMDSCLSRKTTTAESSKLISLE---PSSEEGD-SLSCQL
                 .*.****:*******        :* .*:    :.::: :*:   .**** * *:**:*

AT4G13980.1     NLTLASAPLPDKTASQIAKT-TLKSQELN------------------FNSIETSASEKNR
gm012506_Glyma0 NLTLASCPLQVNRNSYSARSPQIDCQEIGKLAESRFFANGKESDSGVSSNLNVAAEATNL
                ******.**  :  *  *::  :..**:.                   ..::.:*. .* 

AT4G13980.1     GRQEIAVGGSQANAAPPARVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEEKRNGS
gm012506_Glyma0 ALSQEDPSNNQVNPAPPDRVNDVFWEQFLTERPGCSDNEEAMSNYRANPHDEQDEGRSAH
                . .:   ...*.*.*** ****************.****** *.**.**::**:* *.. 

AT4G13980.1     MMLRNTKNIEQLTL
gm012506_Glyma0 GISRNIKNMDQLTL
                 : ** **::****
BoxShade v3.31 C (beta, 970507) Output
AT4G13980.1     M N G A L G N S S A S V S G G E G A G G P A P F L V K T Y E M V D D S S T D Q I V S W S A N N N S F I V W N H A E F S R
gm012506_Glyma0    M D G A P Q S A - - - - - - - - G A G G P A P F L L K T Y D M V D D A S T N D I V S W S S T N N S F V V W N P P E F A R
 
AT4G13980.1     L L L P T Y F K H N N F S S F I R Q L N T Y G F R K I D P E R W E F L N D D F I K D Q K H L L K N I H R R K P I H S H S
gm012506_Glyma0    L L L P T Y F K H N N F S S F I R Q L N T Y G F R K I H P E R W E F A N D E F L K D Q K H L L K N I Y R R K P I H S H S
 
AT4G13980.1     H P P A S S T D Q E R A V L Q E Q M D K L S R E K A A I E A K L L K F K Q Q K V V A K H Q F E E M T E H V D D M E N R Q
gm012506_Glyma0    H P P G S L V D P E R A A F E E E I D K L S R E K T S L E S N I Y N F K Q H Q S T A K P K L E D F L Q R L D G I E Q R Q
 
AT4G13980.1     K K L L N F L E T A I R N P T F V K N F G K K V E Q L D I S A Y N K K R R L P E V E Q S K P P S E D S H L D N S S G S S
gm012506_Glyma0    K Q L L N F F E K A L Q N P T F V E H L S R K I E S M D L S A Y - K K R R L P Q V D H V Q P V A E S S L V D S H S - N F
 
AT4G13980.1     R R E S G N I F H Q N F S N K L R L E L S P A D S D M N M V S H S I Q S S N E E G A S P K G I L S G G D P N T T L T K R
gm012506_Glyma0    R M E F G N V F H Q D F S N K L R L E L S P A V S D M N L V S R S T Q S S N E D G E S P Q K K L S E V E P K G V Q T - R
 
AT4G13980.1     E G L P F A P E A L E L A D T G - - - - - - - - T C - P R R L L L N D N T R V E T L Q Q R L T S S E E T D G S F S C H L
gm012506_Glyma0    T A L T F A P E T L E L A D T G A S F T F K M D S C L S R K T T T A E S S K L I S L E - - - P S S E E G D - S L S C Q L
 
AT4G13980.1     N L T L A S A P L P D K T A S Q I A K T - T L K S Q E L N - - - - - - - - - - - - - - - - - - F N S I E T S A S E K N R
gm012506_Glyma0    N L T L A S C P L Q V N R N S Y S A R S P Q I D C Q E I G K L A E S R F F A N G K E S D S G V S S N L N V A A E A T N L
 
AT4G13980.1     G R Q E I A V G G S Q A N A A P P A R V N D V F W E Q F L T E R P G S S D N E E A S S T Y R G N P Y E E Q E E K R N G S
gm012506_Glyma0    A L S Q E D P S N N Q V N P A P P D R V N D V F W E Q F L T E R P G C S D N E E A M S N Y R A N P H D E Q D E G R S A H
 
AT4G13980.1     M M L R N T K N I E Q L T L
gm012506_Glyma0    G I S R N I K N M D Q L T L
 
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