fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034782 not found in 289aa AT4G14465.1 not_1st 0.549504950 II
Pt041709 not found in 189aa AT4G14465.1 not_1st 0.507425742 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14465.1     -----------------MANPWWTNQSGLAGMVDHSVSSGHHQNHHHQSLLTKGDLGIAM
pt034782_POPTR_ MKRVQRERLRATDHSTILANPWWTGQVGLPGLDSSSNSPS----------LGKINRELSI
pt041709_POPTR_ ------------------------------------------------------------
                                                                            

AT4G14465.1     NQSQ---------DNDQDEEDDPREGAVEVVNRRPRGRPPGSKNKPKAPIFVTRDSPNAL
pt034782_POPTR_ NETSNRSGGRDEDDDDRDTGDEAKEGAVEVGNRRPRGRPPGSKNKPKPPIFVTRDSPNAL
pt041709_POPTR_ ------------------------------------------------------------
                                                                            

AT4G14465.1     RSHVLEISDGSDVADTIAHFSRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEI
pt034782_POPTR_ RSHVMEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEI
pt041709_POPTR_ ----MEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEI
                    :**:.*:***:::*:*:************:**********.****.**:*:*****

AT4G14465.1     LSLTGAFLPGPSPPGSTGLTVYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERL
pt034782_POPTR_ LSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLIAAGPVMVIAATFANATYERL
pt041709_POPTR_ LSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERL
                ***********:************* ***********.*:* *.********:*******

AT4G14465.1     PMEEEEDGGGS--RQIHGGG-DSPPRIGSN-----LPDLSGMAGPGYNMPPHLIPNGAGQ
pt034782_POPTR_ PLEDDEEAGSG--------------AIGSSGQQAGLPDPSSM--PVY-LPPNLMQSGAQQ
pt041709_POPTR_ PLEDDDEAGSGGQGQIQSGANNSPPAIGSSGQQAGLPDPSAM--PIYNLPPNLIPNGAHQ
                *:*::::.*..               ***.     *** *.*  * * :**:*: .** *

AT4G14465.1     LGHEPYTWVH-ARPPY
pt034782_POPTR_ LGHDAYAWAHAARPPY
pt041709_POPTR_ LGHDAYAWAH-ARPPY
                ***:.*:*.* *****
BoxShade v3.31 C (beta, 970507) Output
AT4G14465.1     - - - - - - - - - - - - - - - - - M A N P W W T N Q S G L A G M V D H S V S S G H H Q N H H H Q S L L T K G D L G I A M
pt034782_POPTR_    M K R V Q R E R L R A T D H S T I L A N P W W T G Q V G L P G L D S S S N S P S - - - - - - - - - - L G K I N R E L S I
pt041709_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G14465.1     N Q S Q - - - - - - - - - D N D Q D E E D D P R E G A V E V V N R R P R G R P P G S K N K P K A P I F V T R D S P N A L
pt034782_POPTR_    N E T S N R S G G R D E D D D D R D T G D E A K E G A V E V G N R R P R G R P P G S K N K P K P P I F V T R D S P N A L
pt041709_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G14465.1     R S H V L E I S D G S D V A D T I A H F S R R R Q R G V C V L S G T G S V A N V T L R Q A A A P G G V V S L Q G R F E I
pt034782_POPTR_    R S H V M E I A G G A D V A E S V A Q F A R R R Q R G V C V L S G S G S V A N V T L R Q P A A P G A V V A L H G R F E I
pt041709_POPTR_    - - - - M E I A G G A D V A E S V A Q F A R R R Q R G V C V L S G S G S V A N V T L R Q P A A P G A V V A L H G R F E I
 
AT4G14465.1     L S L T G A F L P G P S P P G S T G L T V Y L A G V Q G Q V V G G S V V G P L L A I G S V M V I A A T F S N A T Y E R L
pt034782_POPTR_    L S L T G A F L P G P A P P G S T G L T V Y L A G G Q G Q V V G G S V V G S L I A A G P V M V I A A T F A N A T Y E R L
pt041709_POPTR_    L S L T G A F L P G P A P P G S T G L T V Y L A G G Q G Q V V G G S V V G S L V A A G P V M V I A A T F A N A T Y E R L
 
AT4G14465.1     P M E E E E D G G G S - - R Q I H G G G - D S P P R I G S N - - - - - L P D L S G M A G P G Y N M P P H L I P N G A G Q
pt034782_POPTR_    P L E D D E E A G S G - - - - - - - - - - - - - - A I G S S G Q Q A G L P D P S S M - - P V Y - L P P N L M Q S G A Q Q
pt041709_POPTR_    P L E D D D E A G S G G Q G Q I Q S G A N N S P P A I G S S G Q Q A G L P D P S A M - - P I Y N L P P N L I P N G A H Q
 
AT4G14465.1     L G H E P Y T W V H - A R P P Y
pt034782_POPTR_    L G H D A Y A W A H A A R P P Y
pt041709_POPTR_    L G H D A Y A W A H - A R P P Y
 
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