fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14465.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026406 not found in 270aa AT4G14465.1 1st_1st 0.551980198 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14465.1     MANPWWTNQSGLAGMVDHSVSSGHHQNHHHQSLLTKGDLGIAMNQSQDNDQDEE------
gm026406_Glyma1 ---------------MDLSIN--------ERSLV---------RERQEEEEEEEDERDNG
                               :* *:.        .:**:         .: *:::::**      

AT4G14465.1     DDPREGAVEVVNRRPRGRPPGSKNKPKAPIFVTRDSPNALRSHVLEISDGSDVADTIAHF
gm026406_Glyma1 DEPKEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQF
                *:*:*****. .***************.**********:*****:*::.*:***:::*:*

AT4G14465.1     SRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGAFLPGPSPPGSTGLT
gm026406_Glyma1 ARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLT
                :************:**********.:***.**:*:****************:***:****

AT4G14465.1     VYLAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPMEEEE-DGGGSRQIHGG--
gm026406_Glyma1 VYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGS--VQGGST
                ***** ***********.*:* *.********:********:**** *****  ::**  

AT4G14465.1     -GDSPPRIGSN----------LPDLSGMAGPG----YNMPPHLIPNGAGQLGHEPYTWV-
gm026406_Glyma1 LGGSPHGIGSSGGGGGSGGGHLP--GGIPGPSSLPLYNLPPNLLPNG-GQVGHEAFAWAH
                 *.**  ***.          **  .*:.**.    **:**:*:*** **:***.::*. 

AT4G14465.1     -HARPPY
gm026406_Glyma1 GHGRPPY
                 *.****
BoxShade v3.31 C (beta, 970507) Output
AT4G14465.1     M A N P W W T N Q S G L A G M V D H S V S S G H H Q N H H H Q S L L T K G D L G I A M N Q S Q D N D Q D E E - - - - - -
gm026406_Glyma1    - - - - - - - - - - - - - - - M D L S I N - - - - - - - - E R S L V - - - - - - - - - R E R Q E E E E E E E D E R D N G
 
AT4G14465.1     D D P R E G A V E V V N R R P R G R P P G S K N K P K A P I F V T R D S P N A L R S H V L E I S D G S D V A D T I A H F
gm026406_Glyma1    D E P K E G A V E A G T R R P R G R P P G S K N K P K P P I F V T R D S P N S L R S H V M E V A G G A D V A E S V A Q F
 
AT4G14465.1     S R R R Q R G V C V L S G T G S V A N V T L R Q A A A P G G V V S L Q G R F E I L S L T G A F L P G P S P P G S T G L T
gm026406_Glyma1    A R R R Q R G V C V L S G S G S V A N V T L R Q P S A P G A V V A L H G R F E I L S L T G A F L P G P A P P G A T G L T
 
AT4G14465.1     V Y L A G V Q G Q V V G G S V V G P L L A I G S V M V I A A T F S N A T Y E R L P M E E E E - D G G G S R Q I H G G - -
gm026406_Glyma1    V Y L A G G Q G Q V V G G S V V G S L V A A G P V M V I A A T F A N A T Y E R L P L E E E E D D G G G S - - V Q G G S T
 
AT4G14465.1     - G D S P P R I G S N - - - - - - - - - - L P D L S G M A G P G - - - - Y N M P P H L I P N G A G Q L G H E P Y T W V -
gm026406_Glyma1    L G G S P H G I G S S G G G G G S G G G H L P - - G G I P G P S S L P L Y N L P P N L L P N G - G Q V G H E A F A W A H
 
AT4G14465.1     - H A R P P Y
gm026406_Glyma1    G H G R P P Y
 
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