fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028983 not found in 224aa AT4G14540.1 1st_1st 0.739130434 Ia
Sb024092 not found in 365aa AT4G14540.1 1st_1st 0.746376811 Ia
Pt016647 not found in 182aa AT4G14540.1 1st_1st 0.778985507 Ia
Pp009284 not found in 218aa AT4G14540.1 1st_1st 0.764492753 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G14540.1     ------------MAD--------------SDNDSGGHKDG-GNASTREQDRFLPIANVSR
pt016647_POPTR_ ------------MAD--------------SDNESGGHNAV-SELSAKEQDRFLPIANVSR
pp009284_Pp1s30 ------------MADSYGHNAGSPESSPHSDNESGGHYRD-QDASVREQDRFLPIANVSR
Os028983_Os07t0 ------------MPD--------------SDNESGGPSNAGEYASAREQDRFLPIANVSR
Sb024092_Sorbi1 LDRTTLVGGWAAMPD--------------SDNESGGPSNA-DFSSPREQDRFLPIANVSR
                            *.*              ***:***        * :*************

AT4G14540.1     IMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG
pt016647_POPTR_ IMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG
pp009284_Pp1s30 IMKKALPSNAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLG
Os028983_Os07t0 IMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG
Sb024092_Sorbi1 IMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG
                ***:***:************************************************:***

AT4G14540.1     FEDYVEPLKVYLQKYREVEGEKT---------TTAGRQGDKEGG-----------GGGGG
pt016647_POPTR_ FEEYVEPLKIYLQKYREMEGEKS---------SMGRPAGEKDGGG-----GANSTGGGGG
pp009284_Pp1s30 FEDYVEPLKVYLHKYRELEGEKA----------STAKGGDQQGGK----EGSQGVMGSMG
Os028983_Os07t0 FEDYIDPLKLYLHKFRELEGEKAIGAAGSGGGGAASSGGSGSGSGSHHHQDASRNNGGYG
Sb024092_Sorbi1 FEDYIEPLKLYLHKFRELEGEKA--ATGVAGSSSGVSQPHRESTPSSAHNGAGGPVGGYG
                **:*::***:**:*:**:****:                  ..             *. *

AT4G14540.1     AGSGSG----------GAPMYGGGMVTTM-------G---------HQFSHHFS------
pt016647_POPTR_ GFNGGG----------GQGMYGGMMM--M-------G---------HHHQGHVYGA-GGF
pp009284_Pp1s30 MSGGMN----GMNGTMNGNMHGHGIPVSMQMLQQSYGQQAPPGMMYSPHQMM-----PQY
Os028983_Os07t0 MYGGGG----GMIMMMGQPMYGSPPASSA-------GYAQPPPPHHHHHQMVMGGK-GAY
Sb024092_Sorbi1 MYGGAGGGGSGMIMMMGQPMYGGSPPAAS-------GYPQPP-----HHQMVMGGKGGAY
                  .* .          .  *:*              *           ..          

AT4G14540.1     ----------------------
pt016647_POPTR_ HHQGNSRANDPP----------
pp009284_Pp1s30 QMPMQSGGNQP--RGV------
Os028983_Os07t0 GHGGGGGGGPSPSSGYGRQDRL
Sb024092_Sorbi1 GHGGGSSSSP---SGLGRQDRL
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     - - - - - - - - - - - - M A D - - - - - - - - - - - - - - S D N D S G G H K D G - G N A S T R E Q D R F L P I A N V S R
pt016647_POPTR_    - - - - - - - - - - - - M A D - - - - - - - - - - - - - - S D N E S G G H N A V - S E L S A K E Q D R F L P I A N V S R
pp009284_Pp1s30    - - - - - - - - - - - - M A D S Y G H N A G S P E S S P H S D N E S G G H Y R D - Q D A S V R E Q D R F L P I A N V S R
Os028983_Os07t0    - - - - - - - - - - - - M P D - - - - - - - - - - - - - - S D N E S G G P S N A G E Y A S A R E Q D R F L P I A N V S R
Sb024092_Sorbi1    L D R T T L V G G W A A M P D - - - - - - - - - - - - - - S D N E S G G P S N A - D F S S P R E Q D R F L P I A N V S R
 
AT4G14540.1     I M K K A L P A N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G
pt016647_POPTR_    I M K K A L P A N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G
pp009284_Pp1s30    I M K K A L P S N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G
Os028983_Os07t0    I M K R A L P A N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G
Sb024092_Sorbi1    I M K K A L P A N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G
 
AT4G14540.1     F E D Y V E P L K V Y L Q K Y R E V E G E K T - - - - - - - - - T T A G R Q G D K E G G - - - - - - - - - - - G G G G G
pt016647_POPTR_    F E E Y V E P L K I Y L Q K Y R E M E G E K S - - - - - - - - - S M G R P A G E K D G G G - - - - - G A N S T G G G G G
pp009284_Pp1s30    F E D Y V E P L K V Y L H K Y R E L E G E K A - - - - - - - - - - S T A K G G D Q Q G G K - - - - E G S Q G V M G S M G
Os028983_Os07t0    F E D Y I D P L K L Y L H K F R E L E G E K A I G A A G S G G G G A A S S G G S G S G S G S H H H Q D A S R N N G G Y G
Sb024092_Sorbi1    F E D Y I E P L K L Y L H K F R E L E G E K A - - A T G V A G S S S G V S Q P H R E S T P S S A H N G A G G P V G G Y G
 
AT4G14540.1     A G S G S G - - - - - - - - - - G A P M Y G G G M V T T M - - - - - - - G - - - - - - - - - H Q F S H H F S - - - - - -
pt016647_POPTR_    G F N G G G - - - - - - - - - - G Q G M Y G G M M M - - M - - - - - - - G - - - - - - - - - H H H Q G H V Y G A - G G F
pp009284_Pp1s30    M S G G M N - - - - G M N G T M N G N M H G H G I P V S M Q M L Q Q S Y G Q Q A P P G M M Y S P H Q M M - - - - - P Q Y
Os028983_Os07t0    M Y G G G G - - - - G M I M M M G Q P M Y G S P P A S S A - - - - - - - G Y A Q P P P P H H H H H Q M V M G G K - G A Y
Sb024092_Sorbi1    M Y G G A G G G G S G M I M M M G Q P M Y G G S P P A A S - - - - - - - G Y P Q P P - - - - - H H Q M V M G G K G G A Y
 
AT4G14540.1     - - - - - - - - - - - - - - - - - - - - - -
pt016647_POPTR_    H H Q G N S R A N D P P - - - - - - - - - -
pp009284_Pp1s30    Q M P M Q S G G N Q P - - R G V - - - - - -
Os028983_Os07t0    G H G G G G G G G P S P S S G Y G R Q D R L
Sb024092_Sorbi1    G H G G G S S S S P - - - S G L G R Q D R L
 
0