fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G14540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp009284 not found in 218aa AT4G14540.1 1st_1st 0.764492753 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G14540.1     MAD--------------SDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKIS
pp009284_Pp1s30 MADSYGHNAGSPESSPHSDNESGGHYRDQDASVREQDRFLPIANVSRIMKKALPSNAKIS
                ***              ***:****  . :**.*********************:*****

AT4G14540.1     KDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQ
pp009284_Pp1s30 KDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLH
                *******************************************:***************:

AT4G14540.1     KYREVEGEKTTTA---GRQGDKEGGGGGGGAGSGSGG---------APMYGGGMVTTM--
pp009284_Pp1s30 KYRELEGEKASTAKGGDQQGGKEGSQGVMGSMGMSGGMNGMNGTMNGNMHGHGIPVSMQM
                ****:****::**   .:**.***. *  *: . ***         . *:* *: .:*  

AT4G14540.1     -----------GHQFSHHFS------------------
pp009284_Pp1s30 LQQSYGQQAPPGMMYSPHQMMPQYQMPMQSGGNQPRGV
                           *  :* *
BoxShade v3.31 C (beta, 970507) Output
AT4G14540.1     M A D - - - - - - - - - - - - - - S D N D S G G H K D G G N A S T R E Q D R F L P I A N V S R I M K K A L P A N A K I S
pp009284_Pp1s30    M A D S Y G H N A G S P E S S P H S D N E S G G H Y R D Q D A S V R E Q D R F L P I A N V S R I M K K A L P S N A K I S
 
AT4G14540.1     K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G F E D Y V E P L K V Y L Q
pp009284_Pp1s30    K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P L K V Y L H
 
AT4G14540.1     K Y R E V E G E K T T T A - - - G R Q G D K E G G G G G G G A G S G S G G - - - - - - - - - A P M Y G G G M V T T M - -
pp009284_Pp1s30    K Y R E L E G E K A S T A K G G D Q Q G G K E G S Q G V M G S M G M S G G M N G M N G T M N G N M H G H G I P V S M Q M
 
AT4G14540.1     - - - - - - - - - - - G H Q F S H H F S - - - - - - - - - - - - - - - - - -
pp009284_Pp1s30    L Q Q S Y G Q Q A P P G M M Y S P H Q M M P Q Y Q M P M Q S G G N Q P R G V
 
0